Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF558Q96NG5 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.86■□□□□ 0.93
ZNF558Q96NG5 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
ZNF558Q96NG5 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.86■□□□□ 0.93
ZNF558Q96NG5 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ZNF558Q96NG5 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.86■□□□□ 0.93
ZNF558Q96NG5 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.86■□□□□ 0.93
ZNF558Q96NG5 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.86■□□□□ 0.93
ZNF558Q96NG5 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
ZNF558Q96NG5 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ZNF558Q96NG5 AL138966.2-201ENST00000621997 464 ntBASIC20.86■□□□□ 0.93
ZNF558Q96NG5 AC010653.2-201ENST00000623505 997 ntBASIC20.86■□□□□ 0.93
ZNF558Q96NG5 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
ZNF558Q96NG5 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF558Q96NG5 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF558Q96NG5 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
ZNF558Q96NG5 LINC00565-201ENST00000562710 2331 ntBASIC20.86■□□□□ 0.93
ZNF558Q96NG5 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF558Q96NG5 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
ZNF558Q96NG5 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF558Q96NG5 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF558Q96NG5 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF558Q96NG5 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF558Q96NG5 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF558Q96NG5 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.85■□□□□ 0.93
ZNF558Q96NG5 RNF152P1-201ENST00000397754 604 ntBASIC20.85■□□□□ 0.93
ZNF558Q96NG5 AC007663.1-201ENST00000438948 1240 ntBASIC20.85■□□□□ 0.93
ZNF558Q96NG5 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.85■□□□□ 0.93
ZNF558Q96NG5 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF558Q96NG5 AC139887.4-201ENST00000607877 719 ntBASIC20.85■□□□□ 0.93
ZNF558Q96NG5 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF558Q96NG5 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.85■□□□□ 0.93
ZNF558Q96NG5 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.85■□□□□ 0.93
ZNF558Q96NG5 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF558Q96NG5 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF558Q96NG5 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF558Q96NG5 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF558Q96NG5 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
ZNF558Q96NG5 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF558Q96NG5 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF558Q96NG5 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.84■□□□□ 0.93
ZNF558Q96NG5 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
ZNF558Q96NG5 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF558Q96NG5 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.84■□□□□ 0.93
ZNF558Q96NG5 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.84■□□□□ 0.93
ZNF558Q96NG5 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.84■□□□□ 0.93
ZNF558Q96NG5 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
ZNF558Q96NG5 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF558Q96NG5 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.84■□□□□ 0.93
ZNF558Q96NG5 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.84■□□□□ 0.93
ZNF558Q96NG5 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF558Q96NG5 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.84■□□□□ 0.93
ZNF558Q96NG5 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.84■□□□□ 0.93
ZNF558Q96NG5 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.84■□□□□ 0.93
ZNF558Q96NG5 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.84■□□□□ 0.93
ZNF558Q96NG5 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.84■□□□□ 0.93
ZNF558Q96NG5 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF558Q96NG5 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.84■□□□□ 0.93
ZNF558Q96NG5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF558Q96NG5 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.83■□□□□ 0.93
ZNF558Q96NG5 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
ZNF558Q96NG5 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.83■□□□□ 0.93
ZNF558Q96NG5 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF558Q96NG5 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF558Q96NG5 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.83■□□□□ 0.93
ZNF558Q96NG5 AL160286.2-201ENST00000567150 934 ntBASIC20.83■□□□□ 0.93
ZNF558Q96NG5 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.83■□□□□ 0.93
ZNF558Q96NG5 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
ZNF558Q96NG5 AC092338.2-201ENST00000568827 1415 ntBASIC20.83■□□□□ 0.93
ZNF558Q96NG5 AP001271.2-201ENST00000624018 1556 ntBASIC20.83■□□□□ 0.92
ZNF558Q96NG5 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.92
ZNF558Q96NG5 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
ZNF558Q96NG5 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZNF558Q96NG5 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZNF558Q96NG5 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
ZNF558Q96NG5 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF558Q96NG5 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.82■□□□□ 0.92
ZNF558Q96NG5 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF558Q96NG5 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF558Q96NG5 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.82■□□□□ 0.92
ZNF558Q96NG5 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF558Q96NG5 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF558Q96NG5 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF558Q96NG5 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
ZNF558Q96NG5 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.82■□□□□ 0.92
ZNF558Q96NG5 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF558Q96NG5 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF558Q96NG5 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.82■□□□□ 0.92
ZNF558Q96NG5 TSPY17P-201ENST00000450329 467 ntBASIC20.82■□□□□ 0.92
ZNF558Q96NG5 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.82■□□□□ 0.92
ZNF558Q96NG5 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF558Q96NG5 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF558Q96NG5 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF558Q96NG5 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.82■□□□□ 0.92
ZNF558Q96NG5 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF558Q96NG5 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
ZNF558Q96NG5 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
ZNF558Q96NG5 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ZNF558Q96NG5 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ZNF558Q96NG5 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms