Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 TCF3P1-201ENST00000423021 1937 ntBASIC20.24■□□□□ 0.83
PRICKLE1Q96MT3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRICKLE1Q96MT3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRICKLE1Q96MT3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRICKLE1Q96MT3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PRICKLE1Q96MT3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
PRICKLE1Q96MT3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.24■□□□□ 0.83
PRICKLE1Q96MT3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.24■□□□□ 0.83
PRICKLE1Q96MT3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRICKLE1Q96MT3 TSPY7P-201ENST00000431358 1114 ntBASIC20.24■□□□□ 0.83
PRICKLE1Q96MT3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRICKLE1Q96MT3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRICKLE1Q96MT3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PRICKLE1Q96MT3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.24■□□□□ 0.83
PRICKLE1Q96MT3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
PRICKLE1Q96MT3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
PRICKLE1Q96MT3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRICKLE1Q96MT3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRICKLE1Q96MT3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.24■□□□□ 0.83
PRICKLE1Q96MT3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRICKLE1Q96MT3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRICKLE1Q96MT3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PRICKLE1Q96MT3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.24■□□□□ 0.83
PRICKLE1Q96MT3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRICKLE1Q96MT3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRICKLE1Q96MT3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRICKLE1Q96MT3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRICKLE1Q96MT3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.23■□□□□ 0.83
PRICKLE1Q96MT3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRICKLE1Q96MT3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRICKLE1Q96MT3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRICKLE1Q96MT3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRICKLE1Q96MT3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PRICKLE1Q96MT3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
PRICKLE1Q96MT3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
PRICKLE1Q96MT3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.23■□□□□ 0.83
PRICKLE1Q96MT3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.23■□□□□ 0.83
PRICKLE1Q96MT3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.23■□□□□ 0.83
PRICKLE1Q96MT3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.23■□□□□ 0.83
PRICKLE1Q96MT3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
PRICKLE1Q96MT3 C1QL1P1-201ENST00000568105 661 ntBASIC20.23■□□□□ 0.83
PRICKLE1Q96MT3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.23■□□□□ 0.83
PRICKLE1Q96MT3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.23■□□□□ 0.83
PRICKLE1Q96MT3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.23■□□□□ 0.83
PRICKLE1Q96MT3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.23■□□□□ 0.83
PRICKLE1Q96MT3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRICKLE1Q96MT3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PRICKLE1Q96MT3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PRICKLE1Q96MT3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.23■□□□□ 0.83
PRICKLE1Q96MT3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.23■□□□□ 0.83
PRICKLE1Q96MT3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PRICKLE1Q96MT3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRICKLE1Q96MT3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PRICKLE1Q96MT3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRICKLE1Q96MT3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.23■□□□□ 0.83
PRICKLE1Q96MT3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.23■□□□□ 0.83
PRICKLE1Q96MT3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PRICKLE1Q96MT3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PRICKLE1Q96MT3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRICKLE1Q96MT3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PRICKLE1Q96MT3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRICKLE1Q96MT3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.22■□□□□ 0.83
PRICKLE1Q96MT3 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.22■□□□□ 0.83
PRICKLE1Q96MT3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PRICKLE1Q96MT3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.22■□□□□ 0.83
PRICKLE1Q96MT3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.22■□□□□ 0.83
PRICKLE1Q96MT3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.22■□□□□ 0.83
PRICKLE1Q96MT3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PRICKLE1Q96MT3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PRICKLE1Q96MT3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.22■□□□□ 0.83
PRICKLE1Q96MT3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.21■□□□□ 0.83
PRICKLE1Q96MT3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.21■□□□□ 0.83
PRICKLE1Q96MT3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PRICKLE1Q96MT3 TMEM179-206ENST00000616017 1645 ntBASIC20.21■□□□□ 0.83
PRICKLE1Q96MT3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PRICKLE1Q96MT3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PRICKLE1Q96MT3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRICKLE1Q96MT3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRICKLE1Q96MT3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRICKLE1Q96MT3 AL353807.1-201ENST00000427475 662 ntBASIC20.21■□□□□ 0.83
PRICKLE1Q96MT3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.21■□□□□ 0.83
PRICKLE1Q96MT3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.21■□□□□ 0.83
PRICKLE1Q96MT3 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.21■□□□□ 0.83
PRICKLE1Q96MT3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRICKLE1Q96MT3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRICKLE1Q96MT3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRICKLE1Q96MT3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRICKLE1Q96MT3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRICKLE1Q96MT3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRICKLE1Q96MT3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PRICKLE1Q96MT3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PRICKLE1Q96MT3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.2■□□□□ 0.82
PRICKLE1Q96MT3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PRICKLE1Q96MT3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PRICKLE1Q96MT3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.2■□□□□ 0.82
PRICKLE1Q96MT3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.2■□□□□ 0.82
PRICKLE1Q96MT3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PRICKLE1Q96MT3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.2■□□□□ 0.82
PRICKLE1Q96MT3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PRICKLE1Q96MT3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms