Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SUSD3Q96L08 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.78■□□□□ 0.92
SUSD3Q96L08 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SUSD3Q96L08 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SUSD3Q96L08 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SUSD3Q96L08 LINC01006-201ENST00000333319 2292 ntBASIC20.78■□□□□ 0.92
SUSD3Q96L08 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SUSD3Q96L08 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SUSD3Q96L08 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SUSD3Q96L08 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SUSD3Q96L08 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SUSD3Q96L08 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SUSD3Q96L08 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.78■□□□□ 0.92
SUSD3Q96L08 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.78■□□□□ 0.92
SUSD3Q96L08 AC004951.3-201ENST00000418645 1148 ntBASIC20.78■□□□□ 0.92
SUSD3Q96L08 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.78■□□□□ 0.92
SUSD3Q96L08 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.78■□□□□ 0.92
SUSD3Q96L08 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.78■□□□□ 0.92
SUSD3Q96L08 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.78■□□□□ 0.92
SUSD3Q96L08 NAPSB-206ENST00000562112 1266 ntBASIC20.78■□□□□ 0.92
SUSD3Q96L08 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.78■□□□□ 0.92
SUSD3Q96L08 AC010947.1-201ENST00000623454 693 ntBASIC20.78■□□□□ 0.92
SUSD3Q96L08 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.78■□□□□ 0.92
SUSD3Q96L08 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SUSD3Q96L08 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SUSD3Q96L08 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SUSD3Q96L08 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
SUSD3Q96L08 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SUSD3Q96L08 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SUSD3Q96L08 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.77■□□□□ 0.92
SUSD3Q96L08 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.77■□□□□ 0.92
SUSD3Q96L08 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SUSD3Q96L08 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SUSD3Q96L08 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.77■□□□□ 0.92
SUSD3Q96L08 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.77■□□□□ 0.92
SUSD3Q96L08 AC008040.2-201ENST00000461049 708 ntBASIC20.77■□□□□ 0.92
SUSD3Q96L08 Z85996.1-201ENST00000494644 937 ntBASIC20.77■□□□□ 0.92
SUSD3Q96L08 KRT18P21-201ENST00000515767 1272 ntBASIC20.77■□□□□ 0.92
SUSD3Q96L08 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.77■□□□□ 0.92
SUSD3Q96L08 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.77■□□□□ 0.92
SUSD3Q96L08 AP000692.2-201ENST00000608391 879 ntBASIC20.77■□□□□ 0.92
SUSD3Q96L08 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.77■□□□□ 0.92
SUSD3Q96L08 AC011298.2-201ENST00000617989 482 ntBASIC20.77■□□□□ 0.92
SUSD3Q96L08 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.77■□□□□ 0.92
SUSD3Q96L08 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SUSD3Q96L08 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
SUSD3Q96L08 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SUSD3Q96L08 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.91
SUSD3Q96L08 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
SUSD3Q96L08 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SUSD3Q96L08 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SUSD3Q96L08 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SUSD3Q96L08 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SUSD3Q96L08 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SUSD3Q96L08 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.76■□□□□ 0.91
SUSD3Q96L08 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SUSD3Q96L08 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SUSD3Q96L08 RCN1P1-201ENST00000400413 996 ntBASIC20.76■□□□□ 0.91
SUSD3Q96L08 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.76■□□□□ 0.91
SUSD3Q96L08 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SUSD3Q96L08 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.76■□□□□ 0.91
SUSD3Q96L08 AC097488.1-201ENST00000507834 756 ntBASIC20.76■□□□□ 0.91
SUSD3Q96L08 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
SUSD3Q96L08 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SUSD3Q96L08 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.76■□□□□ 0.91
SUSD3Q96L08 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SUSD3Q96L08 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.76■□□□□ 0.91
SUSD3Q96L08 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SUSD3Q96L08 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SUSD3Q96L08 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SUSD3Q96L08 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SUSD3Q96L08 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.76■□□□□ 0.91
SUSD3Q96L08 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SUSD3Q96L08 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SUSD3Q96L08 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SUSD3Q96L08 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SUSD3Q96L08 LINC01568-207ENST00000641790 1380 ntBASIC20.75■□□□□ 0.91
SUSD3Q96L08 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.75■□□□□ 0.91
SUSD3Q96L08 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SUSD3Q96L08 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SUSD3Q96L08 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.75■□□□□ 0.91
SUSD3Q96L08 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.75■□□□□ 0.91
SUSD3Q96L08 AL160286.2-201ENST00000567150 934 ntBASIC20.75■□□□□ 0.91
SUSD3Q96L08 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SUSD3Q96L08 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.75■□□□□ 0.91
SUSD3Q96L08 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SUSD3Q96L08 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SUSD3Q96L08 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SUSD3Q96L08 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SUSD3Q96L08 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SUSD3Q96L08 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SUSD3Q96L08 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SUSD3Q96L08 AL157384.1-201ENST00000445995 2473 ntBASIC20.75■□□□□ 0.91
SUSD3Q96L08 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SUSD3Q96L08 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.74■□□□□ 0.91
SUSD3Q96L08 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SUSD3Q96L08 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.74■□□□□ 0.91
SUSD3Q96L08 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SUSD3Q96L08 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SUSD3Q96L08 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms