Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SHDQ96IW2 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHDQ96IW2 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.84■□□□□ 0.77
SHDQ96IW2 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.84■□□□□ 0.77
SHDQ96IW2 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
SHDQ96IW2 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHDQ96IW2 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.84■□□□□ 0.77
SHDQ96IW2 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.84■□□□□ 0.77
SHDQ96IW2 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SHDQ96IW2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.84■□□□□ 0.77
SHDQ96IW2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHDQ96IW2 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHDQ96IW2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHDQ96IW2 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SHDQ96IW2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SHDQ96IW2 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SHDQ96IW2 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHDQ96IW2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.83■□□□□ 0.77
SHDQ96IW2 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHDQ96IW2 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.83■□□□□ 0.77
SHDQ96IW2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
SHDQ96IW2 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.83■□□□□ 0.77
SHDQ96IW2 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.83■□□□□ 0.77
SHDQ96IW2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.83■□□□□ 0.77
SHDQ96IW2 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.83■□□□□ 0.77
SHDQ96IW2 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.83■□□□□ 0.77
SHDQ96IW2 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SHDQ96IW2 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
SHDQ96IW2 KRT8P8-201ENST00000434750 1448 ntBASIC19.83■□□□□ 0.76
SHDQ96IW2 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SHDQ96IW2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SHDQ96IW2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.83■□□□□ 0.76
SHDQ96IW2 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SHDQ96IW2 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.82■□□□□ 0.76
SHDQ96IW2 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHDQ96IW2 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHDQ96IW2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SHDQ96IW2 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHDQ96IW2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHDQ96IW2 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SHDQ96IW2 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SHDQ96IW2 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHDQ96IW2 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SHDQ96IW2 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.82■□□□□ 0.76
SHDQ96IW2 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SHDQ96IW2 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.82■□□□□ 0.76
SHDQ96IW2 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SHDQ96IW2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.82■□□□□ 0.76
SHDQ96IW2 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.82■□□□□ 0.76
SHDQ96IW2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SHDQ96IW2 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SHDQ96IW2 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.82■□□□□ 0.76
SHDQ96IW2 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHDQ96IW2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.82■□□□□ 0.76
SHDQ96IW2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.82■□□□□ 0.76
SHDQ96IW2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SHDQ96IW2 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SHDQ96IW2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHDQ96IW2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHDQ96IW2 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SHDQ96IW2 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.81■□□□□ 0.76
SHDQ96IW2 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.81■□□□□ 0.76
SHDQ96IW2 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHDQ96IW2 TMEM179-206ENST00000616017 1645 ntBASIC19.81■□□□□ 0.76
SHDQ96IW2 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SHDQ96IW2 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHDQ96IW2 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SHDQ96IW2 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.81■□□□□ 0.76
SHDQ96IW2 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.81■□□□□ 0.76
SHDQ96IW2 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.81■□□□□ 0.76
SHDQ96IW2 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.81■□□□□ 0.76
SHDQ96IW2 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.81■□□□□ 0.76
SHDQ96IW2 AL160286.2-201ENST00000567150 934 ntBASIC19.81■□□□□ 0.76
SHDQ96IW2 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHDQ96IW2 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SHDQ96IW2 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SHDQ96IW2 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHDQ96IW2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHDQ96IW2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHDQ96IW2 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHDQ96IW2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SHDQ96IW2 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHDQ96IW2 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SHDQ96IW2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SHDQ96IW2 AC012676.1-201ENST00000574705 1949 ntBASIC19.8■□□□□ 0.76
SHDQ96IW2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHDQ96IW2 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
SHDQ96IW2 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.8■□□□□ 0.76
SHDQ96IW2 FP700111.2-201ENST00000619190 1892 ntBASIC19.8■□□□□ 0.76
SHDQ96IW2 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHDQ96IW2 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHDQ96IW2 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHDQ96IW2 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHDQ96IW2 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHDQ96IW2 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHDQ96IW2 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHDQ96IW2 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHDQ96IW2 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.8■□□□□ 0.76
SHDQ96IW2 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.8■□□□□ 0.76
SHDQ96IW2 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms