Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCD1Q96GM5 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCD1Q96GM5 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
SMARCD1Q96GM5 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
SMARCD1Q96GM5 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SMARCD1Q96GM5 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
SMARCD1Q96GM5 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SMARCD1Q96GM5 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCD1Q96GM5 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.64■□□□□ 0.89
SMARCD1Q96GM5 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCD1Q96GM5 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SMARCD1Q96GM5 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
SMARCD1Q96GM5 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCD1Q96GM5 FAM197Y1-201ENST00000421178 764 ntBASIC20.64■□□□□ 0.89
SMARCD1Q96GM5 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCD1Q96GM5 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.64■□□□□ 0.89
SMARCD1Q96GM5 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.64■□□□□ 0.89
SMARCD1Q96GM5 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.64■□□□□ 0.89
SMARCD1Q96GM5 MIR4785-201ENST00000585005 73 ntBASIC20.64■□□□□ 0.89
SMARCD1Q96GM5 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.64■□□□□ 0.89
SMARCD1Q96GM5 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.64■□□□□ 0.89
SMARCD1Q96GM5 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.64■□□□□ 0.89
SMARCD1Q96GM5 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCD1Q96GM5 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCD1Q96GM5 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.64■□□□□ 0.89
SMARCD1Q96GM5 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
SMARCD1Q96GM5 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.64■□□□□ 0.89
SMARCD1Q96GM5 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.64■□□□□ 0.89
SMARCD1Q96GM5 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SMARCD1Q96GM5 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCD1Q96GM5 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.64■□□□□ 0.89
SMARCD1Q96GM5 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.63■□□□□ 0.89
SMARCD1Q96GM5 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCD1Q96GM5 KRT16P1-201ENST00000399124 1418 ntBASIC20.63■□□□□ 0.89
SMARCD1Q96GM5 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCD1Q96GM5 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCD1Q96GM5 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
SMARCD1Q96GM5 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
SMARCD1Q96GM5 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.63■□□□□ 0.89
SMARCD1Q96GM5 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCD1Q96GM5 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCD1Q96GM5 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCD1Q96GM5 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCD1Q96GM5 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SMARCD1Q96GM5 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
SMARCD1Q96GM5 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCD1Q96GM5 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.63■□□□□ 0.89
SMARCD1Q96GM5 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.63■□□□□ 0.89
SMARCD1Q96GM5 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SMARCD1Q96GM5 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCD1Q96GM5 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCD1Q96GM5 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCD1Q96GM5 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCD1Q96GM5 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCD1Q96GM5 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCD1Q96GM5 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCD1Q96GM5 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCD1Q96GM5 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCD1Q96GM5 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCD1Q96GM5 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCD1Q96GM5 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.62■□□□□ 0.89
SMARCD1Q96GM5 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCD1Q96GM5 KRT17P2-201ENST00000300992 1314 ntBASIC20.62■□□□□ 0.89
SMARCD1Q96GM5 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SMARCD1Q96GM5 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCD1Q96GM5 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCD1Q96GM5 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.62■□□□□ 0.89
SMARCD1Q96GM5 AL445675.2-201ENST00000620291 557 ntBASIC20.62■□□□□ 0.89
SMARCD1Q96GM5 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCD1Q96GM5 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.62■□□□□ 0.89
SMARCD1Q96GM5 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCD1Q96GM5 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCD1Q96GM5 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCD1Q96GM5 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCD1Q96GM5 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCD1Q96GM5 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SMARCD1Q96GM5 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMARCD1Q96GM5 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.61■□□□□ 0.89
SMARCD1Q96GM5 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMARCD1Q96GM5 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SMARCD1Q96GM5 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SMARCD1Q96GM5 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SMARCD1Q96GM5 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMARCD1Q96GM5 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMARCD1Q96GM5 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMARCD1Q96GM5 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMARCD1Q96GM5 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SMARCD1Q96GM5 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SMARCD1Q96GM5 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.61■□□□□ 0.89
SMARCD1Q96GM5 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.61■□□□□ 0.89
SMARCD1Q96GM5 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.61■□□□□ 0.89
SMARCD1Q96GM5 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.61■□□□□ 0.89
SMARCD1Q96GM5 CR392000.1-201ENST00000624770 1228 ntBASIC20.61■□□□□ 0.89
SMARCD1Q96GM5 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMARCD1Q96GM5 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMARCD1Q96GM5 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMARCD1Q96GM5 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMARCD1Q96GM5 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCD1Q96GM5 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.6■□□□□ 0.89
SMARCD1Q96GM5 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms