Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 FAM210CP-201ENST00000445714 574 ntBASIC20.01■□□□□ 0.79
SHROOM3Q8TF72 AC128676.1-201ENST00000454392 318 ntBASIC20.01■□□□□ 0.79
SHROOM3Q8TF72 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SHROOM3Q8TF72 C1QBPP2-201ENST00000528754 825 ntBASIC20.01■□□□□ 0.79
SHROOM3Q8TF72 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.01■□□□□ 0.79
SHROOM3Q8TF72 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.01■□□□□ 0.79
SHROOM3Q8TF72 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
SHROOM3Q8TF72 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SHROOM3Q8TF72 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
SHROOM3Q8TF72 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
SHROOM3Q8TF72 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SHROOM3Q8TF72 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SHROOM3Q8TF72 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20■□□□□ 0.79
SHROOM3Q8TF72 NBPF21P-201ENST00000425093 1451 ntBASIC20■□□□□ 0.79
SHROOM3Q8TF72 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20■□□□□ 0.79
SHROOM3Q8TF72 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SHROOM3Q8TF72 AC124016.1-201ENST00000609552 612 ntBASIC20■□□□□ 0.79
SHROOM3Q8TF72 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SHROOM3Q8TF72 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SHROOM3Q8TF72 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20■□□□□ 0.79
SHROOM3Q8TF72 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20■□□□□ 0.79
SHROOM3Q8TF72 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SHROOM3Q8TF72 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHROOM3Q8TF72 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHROOM3Q8TF72 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
SHROOM3Q8TF72 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHROOM3Q8TF72 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHROOM3Q8TF72 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SHROOM3Q8TF72 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHROOM3Q8TF72 AC211429.1-201ENST00000415277 523 ntBASIC19.99■□□□□ 0.79
SHROOM3Q8TF72 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHROOM3Q8TF72 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.99■□□□□ 0.79
SHROOM3Q8TF72 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SHROOM3Q8TF72 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.99■□□□□ 0.79
SHROOM3Q8TF72 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SHROOM3Q8TF72 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHROOM3Q8TF72 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.99■□□□□ 0.79
SHROOM3Q8TF72 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SHROOM3Q8TF72 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHROOM3Q8TF72 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SHROOM3Q8TF72 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHROOM3Q8TF72 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.99■□□□□ 0.79
SHROOM3Q8TF72 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHROOM3Q8TF72 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.99■□□□□ 0.79
SHROOM3Q8TF72 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.99■□□□□ 0.79
SHROOM3Q8TF72 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
SHROOM3Q8TF72 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SHROOM3Q8TF72 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHROOM3Q8TF72 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SHROOM3Q8TF72 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHROOM3Q8TF72 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SHROOM3Q8TF72 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
SHROOM3Q8TF72 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
SHROOM3Q8TF72 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHROOM3Q8TF72 FAM197Y4-202ENST00000622692 608 ntBASIC19.98■□□□□ 0.79
SHROOM3Q8TF72 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHROOM3Q8TF72 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHROOM3Q8TF72 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SHROOM3Q8TF72 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHROOM3Q8TF72 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHROOM3Q8TF72 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHROOM3Q8TF72 AC116562.4-201ENST00000641316 2276 ntBASIC19.98■□□□□ 0.79
SHROOM3Q8TF72 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SHROOM3Q8TF72 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SHROOM3Q8TF72 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.97■□□□□ 0.79
SHROOM3Q8TF72 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHROOM3Q8TF72 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.97■□□□□ 0.79
SHROOM3Q8TF72 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SHROOM3Q8TF72 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.97■□□□□ 0.79
SHROOM3Q8TF72 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.97■□□□□ 0.79
SHROOM3Q8TF72 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.97■□□□□ 0.79
SHROOM3Q8TF72 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHROOM3Q8TF72 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.97■□□□□ 0.79
SHROOM3Q8TF72 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
SHROOM3Q8TF72 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SHROOM3Q8TF72 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.97■□□□□ 0.79
SHROOM3Q8TF72 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.97■□□□□ 0.79
SHROOM3Q8TF72 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SHROOM3Q8TF72 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHROOM3Q8TF72 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHROOM3Q8TF72 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHROOM3Q8TF72 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.97■□□□□ 0.79
SHROOM3Q8TF72 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.97■□□□□ 0.79
SHROOM3Q8TF72 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.97■□□□□ 0.79
SHROOM3Q8TF72 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.97■□□□□ 0.79
SHROOM3Q8TF72 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.97■□□□□ 0.79
SHROOM3Q8TF72 AL023875.1-201ENST00000640777 796 ntBASIC19.97■□□□□ 0.79
SHROOM3Q8TF72 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SHROOM3Q8TF72 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
SHROOM3Q8TF72 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.97■□□□□ 0.79
SHROOM3Q8TF72 AC007952.6-201ENST00000573168 2673 ntBASIC19.96■□□□□ 0.79
SHROOM3Q8TF72 AC003957.1-201ENST00000625108 2673 ntBASIC19.96■□□□□ 0.79
SHROOM3Q8TF72 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHROOM3Q8TF72 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
SHROOM3Q8TF72 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHROOM3Q8TF72 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHROOM3Q8TF72 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHROOM3Q8TF72 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHROOM3Q8TF72 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SHROOM3Q8TF72 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms