Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH3RF2Q8TEC5 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.35■□□□□ 0.85
SH3RF2Q8TEC5 AL390955.1-201ENST00000428694 934 ntBASIC20.35■□□□□ 0.85
SH3RF2Q8TEC5 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.35■□□□□ 0.85
SH3RF2Q8TEC5 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.35■□□□□ 0.85
SH3RF2Q8TEC5 MIR6786-201ENST00000616843 113 ntBASIC20.35■□□□□ 0.85
SH3RF2Q8TEC5 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.35■□□□□ 0.85
SH3RF2Q8TEC5 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH3RF2Q8TEC5 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.35■□□□□ 0.85
SH3RF2Q8TEC5 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH3RF2Q8TEC5 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SH3RF2Q8TEC5 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH3RF2Q8TEC5 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH3RF2Q8TEC5 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SH3RF2Q8TEC5 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH3RF2Q8TEC5 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.34■□□□□ 0.85
SH3RF2Q8TEC5 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SH3RF2Q8TEC5 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.34■□□□□ 0.85
SH3RF2Q8TEC5 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.34■□□□□ 0.85
SH3RF2Q8TEC5 AC020907.5-201ENST00000624372 1936 ntBASIC20.34■□□□□ 0.85
SH3RF2Q8TEC5 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH3RF2Q8TEC5 RCN1P1-201ENST00000400413 996 ntBASIC20.34■□□□□ 0.85
SH3RF2Q8TEC5 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.34■□□□□ 0.85
SH3RF2Q8TEC5 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.34■□□□□ 0.85
SH3RF2Q8TEC5 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.34■□□□□ 0.85
SH3RF2Q8TEC5 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SH3RF2Q8TEC5 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH3RF2Q8TEC5 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH3RF2Q8TEC5 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH3RF2Q8TEC5 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.34■□□□□ 0.85
SH3RF2Q8TEC5 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH3RF2Q8TEC5 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SH3RF2Q8TEC5 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH3RF2Q8TEC5 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH3RF2Q8TEC5 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SH3RF2Q8TEC5 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.33■□□□□ 0.85
SH3RF2Q8TEC5 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SH3RF2Q8TEC5 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SH3RF2Q8TEC5 GABARAPL3-202ENST00000624044 1851 ntBASIC20.33■□□□□ 0.85
SH3RF2Q8TEC5 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
SH3RF2Q8TEC5 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
SH3RF2Q8TEC5 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.33■□□□□ 0.85
SH3RF2Q8TEC5 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
SH3RF2Q8TEC5 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SH3RF2Q8TEC5 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SH3RF2Q8TEC5 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.33■□□□□ 0.85
SH3RF2Q8TEC5 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.33■□□□□ 0.85
SH3RF2Q8TEC5 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.33■□□□□ 0.85
SH3RF2Q8TEC5 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.33■□□□□ 0.85
SH3RF2Q8TEC5 FITM1-202ENST00000559294 800 ntBASIC20.33■□□□□ 0.85
SH3RF2Q8TEC5 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.33■□□□□ 0.85
SH3RF2Q8TEC5 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SH3RF2Q8TEC5 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
SH3RF2Q8TEC5 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SH3RF2Q8TEC5 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
SH3RF2Q8TEC5 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
SH3RF2Q8TEC5 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SH3RF2Q8TEC5 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SH3RF2Q8TEC5 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SH3RF2Q8TEC5 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SH3RF2Q8TEC5 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SH3RF2Q8TEC5 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SH3RF2Q8TEC5 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
SH3RF2Q8TEC5 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SH3RF2Q8TEC5 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.32■□□□□ 0.84
SH3RF2Q8TEC5 PCDHAC2-203ENST00000615316 3011 ntBASIC20.32■□□□□ 0.84
SH3RF2Q8TEC5 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SH3RF2Q8TEC5 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SH3RF2Q8TEC5 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SH3RF2Q8TEC5 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SH3RF2Q8TEC5 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.32■□□□□ 0.84
SH3RF2Q8TEC5 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SH3RF2Q8TEC5 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.32■□□□□ 0.84
SH3RF2Q8TEC5 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SH3RF2Q8TEC5 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.32■□□□□ 0.84
SH3RF2Q8TEC5 AC026271.3-201ENST00000571884 352 ntBASIC20.32■□□□□ 0.84
SH3RF2Q8TEC5 AC145285.6-201ENST00000604632 637 ntBASIC20.32■□□□□ 0.84
SH3RF2Q8TEC5 AC010331.1-201ENST00000611423 582 ntBASIC20.32■□□□□ 0.84
SH3RF2Q8TEC5 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SH3RF2Q8TEC5 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
SH3RF2Q8TEC5 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SH3RF2Q8TEC5 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SH3RF2Q8TEC5 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SH3RF2Q8TEC5 FSCN1P1-201ENST00000568912 1481 ntBASIC20.31■□□□□ 0.84
SH3RF2Q8TEC5 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SH3RF2Q8TEC5 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.31■□□□□ 0.84
SH3RF2Q8TEC5 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SH3RF2Q8TEC5 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.31■□□□□ 0.84
SH3RF2Q8TEC5 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.31■□□□□ 0.84
SH3RF2Q8TEC5 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
SH3RF2Q8TEC5 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.31■□□□□ 0.84
SH3RF2Q8TEC5 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SH3RF2Q8TEC5 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SH3RF2Q8TEC5 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SH3RF2Q8TEC5 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SH3RF2Q8TEC5 MESTP1-201ENST00000404287 994 ntBASIC20.31■□□□□ 0.84
SH3RF2Q8TEC5 AC004980.1-204ENST00000429707 299 ntBASIC20.31■□□□□ 0.84
SH3RF2Q8TEC5 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
SH3RF2Q8TEC5 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.31■□□□□ 0.84
SH3RF2Q8TEC5 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms