Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPSF7Q8N684 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CPSF7Q8N684 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPSF7Q8N684 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPSF7Q8N684 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.12■□□□□ 0.65
CPSF7Q8N684 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPSF7Q8N684 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPSF7Q8N684 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CPSF7Q8N684 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPSF7Q8N684 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.12■□□□□ 0.65
CPSF7Q8N684 AP001271.2-201ENST00000624018 1556 ntBASIC19.12■□□□□ 0.65
CPSF7Q8N684 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPSF7Q8N684 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CPSF7Q8N684 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPSF7Q8N684 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CPSF7Q8N684 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPSF7Q8N684 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.12■□□□□ 0.65
CPSF7Q8N684 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.12■□□□□ 0.65
CPSF7Q8N684 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CPSF7Q8N684 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.12■□□□□ 0.65
CPSF7Q8N684 CD99P1-205ENST00000527459 561 ntBASIC19.12■□□□□ 0.65
CPSF7Q8N684 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.12■□□□□ 0.65
CPSF7Q8N684 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.12■□□□□ 0.65
CPSF7Q8N684 AC098934.4-201ENST00000564127 592 ntBASIC19.12■□□□□ 0.65
CPSF7Q8N684 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CPSF7Q8N684 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPSF7Q8N684 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CPSF7Q8N684 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPSF7Q8N684 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPSF7Q8N684 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPSF7Q8N684 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPSF7Q8N684 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.12■□□□□ 0.65
CPSF7Q8N684 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.12■□□□□ 0.65
CPSF7Q8N684 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CPSF7Q8N684 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.11■□□□□ 0.65
CPSF7Q8N684 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CPSF7Q8N684 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPSF7Q8N684 MKRN4P-201ENST00000444706 1521 ntBASIC19.11■□□□□ 0.65
CPSF7Q8N684 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPSF7Q8N684 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.11■□□□□ 0.65
CPSF7Q8N684 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPSF7Q8N684 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPSF7Q8N684 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPSF7Q8N684 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPSF7Q8N684 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPSF7Q8N684 AC069152.1-201ENST00000438030 544 ntBASIC19.11■□□□□ 0.65
CPSF7Q8N684 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.11■□□□□ 0.65
CPSF7Q8N684 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPSF7Q8N684 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.11■□□□□ 0.65
CPSF7Q8N684 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.11■□□□□ 0.65
CPSF7Q8N684 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
CPSF7Q8N684 AC069236.1-201ENST00000604339 616 ntBASIC19.11■□□□□ 0.65
CPSF7Q8N684 AC016405.3-201ENST00000607710 860 ntBASIC19.11■□□□□ 0.65
CPSF7Q8N684 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.11■□□□□ 0.65
CPSF7Q8N684 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPSF7Q8N684 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.11■□□□□ 0.65
CPSF7Q8N684 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.11■□□□□ 0.65
CPSF7Q8N684 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPSF7Q8N684 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPSF7Q8N684 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPSF7Q8N684 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
CPSF7Q8N684 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPSF7Q8N684 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPSF7Q8N684 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CPSF7Q8N684 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPSF7Q8N684 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPSF7Q8N684 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPSF7Q8N684 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CPSF7Q8N684 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.1■□□□□ 0.65
CPSF7Q8N684 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPSF7Q8N684 ABHD17AP1-201ENST00000358206 933 ntBASIC19.1■□□□□ 0.65
CPSF7Q8N684 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPSF7Q8N684 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPSF7Q8N684 AC093787.1-201ENST00000450396 207 ntBASIC19.1■□□□□ 0.65
CPSF7Q8N684 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.1■□□□□ 0.65
CPSF7Q8N684 KRT18P6-201ENST00000555540 1265 ntBASIC19.1■□□□□ 0.65
CPSF7Q8N684 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.1■□□□□ 0.65
CPSF7Q8N684 OR10C1-204ENST00000622521 1039 ntBASIC19.1■□□□□ 0.65
CPSF7Q8N684 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPSF7Q8N684 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPSF7Q8N684 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPSF7Q8N684 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.1■□□□□ 0.65
CPSF7Q8N684 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPSF7Q8N684 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPSF7Q8N684 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPSF7Q8N684 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.09■□□□□ 0.65
CPSF7Q8N684 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPSF7Q8N684 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPSF7Q8N684 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CPSF7Q8N684 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CPSF7Q8N684 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPSF7Q8N684 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPSF7Q8N684 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPSF7Q8N684 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.09■□□□□ 0.65
CPSF7Q8N684 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.09■□□□□ 0.65
CPSF7Q8N684 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CPSF7Q8N684 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.09■□□□□ 0.65
CPSF7Q8N684 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.09■□□□□ 0.65
CPSF7Q8N684 AC133041.1-202ENST00000642053 222 ntBASIC19.09■□□□□ 0.65
CPSF7Q8N684 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms