Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC33Q8N5R6 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC33Q8N5R6 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC33Q8N5R6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC33Q8N5R6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.55■□□□□ 0.88
CCDC33Q8N5R6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC33Q8N5R6 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC33Q8N5R6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC33Q8N5R6 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC33Q8N5R6 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC33Q8N5R6 KRT17P2-201ENST00000300992 1314 ntBASIC20.54■□□□□ 0.88
CCDC33Q8N5R6 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC33Q8N5R6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.54■□□□□ 0.88
CCDC33Q8N5R6 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC33Q8N5R6 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC33Q8N5R6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC33Q8N5R6 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC33Q8N5R6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.54■□□□□ 0.88
CCDC33Q8N5R6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.54■□□□□ 0.88
CCDC33Q8N5R6 BX088651.1-201ENST00000540551 451 ntBASIC20.54■□□□□ 0.88
CCDC33Q8N5R6 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.54■□□□□ 0.88
CCDC33Q8N5R6 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CCDC33Q8N5R6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC33Q8N5R6 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC33Q8N5R6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CCDC33Q8N5R6 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CCDC33Q8N5R6 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CCDC33Q8N5R6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC33Q8N5R6 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC33Q8N5R6 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC33Q8N5R6 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC33Q8N5R6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC33Q8N5R6 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC33Q8N5R6 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC33Q8N5R6 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC33Q8N5R6 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC33Q8N5R6 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CCDC33Q8N5R6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC33Q8N5R6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC33Q8N5R6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CCDC33Q8N5R6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC33Q8N5R6 TSPY15P-201ENST00000457163 923 ntBASIC20.53■□□□□ 0.88
CCDC33Q8N5R6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC33Q8N5R6 AL031963.3-201ENST00000606441 850 ntBASIC20.53■□□□□ 0.88
CCDC33Q8N5R6 AP001412.1-201ENST00000608405 714 ntBASIC20.53■□□□□ 0.88
CCDC33Q8N5R6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CCDC33Q8N5R6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CCDC33Q8N5R6 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC33Q8N5R6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC33Q8N5R6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC33Q8N5R6 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC33Q8N5R6 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC33Q8N5R6 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC33Q8N5R6 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC33Q8N5R6 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC33Q8N5R6 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC33Q8N5R6 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CCDC33Q8N5R6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC33Q8N5R6 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC33Q8N5R6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC33Q8N5R6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC33Q8N5R6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CCDC33Q8N5R6 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC33Q8N5R6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC33Q8N5R6 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC33Q8N5R6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC33Q8N5R6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC33Q8N5R6 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC33Q8N5R6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC33Q8N5R6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.52■□□□□ 0.87
CCDC33Q8N5R6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
CCDC33Q8N5R6 KRT8P20-201ENST00000423953 1409 ntBASIC20.52■□□□□ 0.87
CCDC33Q8N5R6 AL158211.5-201ENST00000623583 2518 ntBASIC20.52■□□□□ 0.87
CCDC33Q8N5R6 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.52■□□□□ 0.87
CCDC33Q8N5R6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC33Q8N5R6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC33Q8N5R6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC33Q8N5R6 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC33Q8N5R6 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC33Q8N5R6 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC33Q8N5R6 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC33Q8N5R6 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC33Q8N5R6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.51■□□□□ 0.87
CCDC33Q8N5R6 PRKY-204ENST00000533551 1019 ntBASIC20.51■□□□□ 0.87
CCDC33Q8N5R6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC33Q8N5R6 LINC01023-201ENST00000606054 436 ntBASIC20.51■□□□□ 0.87
CCDC33Q8N5R6 AC113410.3-201ENST00000623366 203 ntBASIC20.51■□□□□ 0.87
CCDC33Q8N5R6 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC33Q8N5R6 RNF165-205ENST00000588679 2904 ntBASIC20.51■□□□□ 0.87
CCDC33Q8N5R6 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC33Q8N5R6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC33Q8N5R6 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC33Q8N5R6 AL135905.2-201ENST00000584934 1404 ntBASIC20.51■□□□□ 0.87
CCDC33Q8N5R6 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC33Q8N5R6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC33Q8N5R6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC33Q8N5R6 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.5■□□□□ 0.87
CCDC33Q8N5R6 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC33Q8N5R6 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC33Q8N5R6 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms