Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.48■□□□□ 0.07
TTC9CQ8N5M4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TTC9CQ8N5M4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.48■□□□□ 0.07
TTC9CQ8N5M4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TTC9CQ8N5M4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.48■□□□□ 0.07
TTC9CQ8N5M4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TTC9CQ8N5M4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TTC9CQ8N5M4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TTC9CQ8N5M4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TTC9CQ8N5M4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TTC9CQ8N5M4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.47■□□□□ 0.07
TTC9CQ8N5M4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TTC9CQ8N5M4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TTC9CQ8N5M4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TTC9CQ8N5M4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TTC9CQ8N5M4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC15.47■□□□□ 0.07
TTC9CQ8N5M4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TTC9CQ8N5M4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TTC9CQ8N5M4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TTC9CQ8N5M4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TTC9CQ8N5M4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TTC9CQ8N5M4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TTC9CQ8N5M4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC15.47■□□□□ 0.07
TTC9CQ8N5M4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC15.47■□□□□ 0.07
TTC9CQ8N5M4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TTC9CQ8N5M4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC15.47■□□□□ 0.07
TTC9CQ8N5M4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC15.47■□□□□ 0.07
TTC9CQ8N5M4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TTC9CQ8N5M4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TTC9CQ8N5M4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC15.47■□□□□ 0.07
TTC9CQ8N5M4 SOX15-203ENST00000570788 1093 ntBASIC15.47■□□□□ 0.07
TTC9CQ8N5M4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC15.47■□□□□ 0.07
TTC9CQ8N5M4 AC008687.6-201ENST00000596318 630 ntBASIC15.47■□□□□ 0.07
TTC9CQ8N5M4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC15.47■□□□□ 0.07
TTC9CQ8N5M4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
TTC9CQ8N5M4 AL121906.2-201ENST00000621597 723 ntBASIC15.47■□□□□ 0.07
TTC9CQ8N5M4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TTC9CQ8N5M4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TTC9CQ8N5M4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TTC9CQ8N5M4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TTC9CQ8N5M4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TTC9CQ8N5M4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.47■□□□□ 0.07
TTC9CQ8N5M4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.47■□□□□ 0.07
TTC9CQ8N5M4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TTC9CQ8N5M4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TTC9CQ8N5M4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TTC9CQ8N5M4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TTC9CQ8N5M4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
TTC9CQ8N5M4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC15.46■□□□□ 0.07
TTC9CQ8N5M4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC15.46■□□□□ 0.07
TTC9CQ8N5M4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TTC9CQ8N5M4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TTC9CQ8N5M4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC15.46■□□□□ 0.07
TTC9CQ8N5M4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.46■□□□□ 0.07
TTC9CQ8N5M4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TTC9CQ8N5M4 AC124283.5-201ENST00000624661 1809 ntBASIC15.46■□□□□ 0.07
TTC9CQ8N5M4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TTC9CQ8N5M4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TTC9CQ8N5M4 UNC93B4-201ENST00000505679 747 ntBASIC15.46■□□□□ 0.07
TTC9CQ8N5M4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TTC9CQ8N5M4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
TTC9CQ8N5M4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TTC9CQ8N5M4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC15.46■□□□□ 0.07
TTC9CQ8N5M4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TTC9CQ8N5M4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TTC9CQ8N5M4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC15.46■□□□□ 0.07
TTC9CQ8N5M4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TTC9CQ8N5M4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC15.46■□□□□ 0.07
TTC9CQ8N5M4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TTC9CQ8N5M4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
TTC9CQ8N5M4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
TTC9CQ8N5M4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC15.46■□□□□ 0.06
TTC9CQ8N5M4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC15.46■□□□□ 0.06
TTC9CQ8N5M4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
TTC9CQ8N5M4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.06
TTC9CQ8N5M4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TTC9CQ8N5M4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC15.45■□□□□ 0.06
TTC9CQ8N5M4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TTC9CQ8N5M4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TTC9CQ8N5M4 AC007952.6-201ENST00000573168 2673 ntBASIC15.45■□□□□ 0.06
TTC9CQ8N5M4 AC003957.1-201ENST00000625108 2673 ntBASIC15.45■□□□□ 0.06
TTC9CQ8N5M4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TTC9CQ8N5M4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC15.45■□□□□ 0.06
TTC9CQ8N5M4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TTC9CQ8N5M4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC15.45■□□□□ 0.06
TTC9CQ8N5M4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TTC9CQ8N5M4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TTC9CQ8N5M4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TTC9CQ8N5M4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC15.45■□□□□ 0.06
TTC9CQ8N5M4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC15.45■□□□□ 0.06
TTC9CQ8N5M4 APTR-205ENST00000447009 902 ntTSL 2 BASIC15.45■□□□□ 0.06
TTC9CQ8N5M4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15.45■□□□□ 0.06
TTC9CQ8N5M4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC15.45■□□□□ 0.06
TTC9CQ8N5M4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC15.45■□□□□ 0.06
TTC9CQ8N5M4 AL121829.2-201ENST00000620908 328 ntBASIC15.45■□□□□ 0.06
TTC9CQ8N5M4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC15.45■□□□□ 0.06
TTC9CQ8N5M4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TTC9CQ8N5M4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC15.45■□□□□ 0.06
TTC9CQ8N5M4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TTC9CQ8N5M4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms