Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TTC39CQ8N584 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TTC39CQ8N584 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
TTC39CQ8N584 UBE2SP1-201ENST00000450587 669 ntBASIC20.85■□□□□ 0.93
TTC39CQ8N584 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.85■□□□□ 0.93
TTC39CQ8N584 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TTC39CQ8N584 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.85■□□□□ 0.93
TTC39CQ8N584 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TTC39CQ8N584 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.85■□□□□ 0.93
TTC39CQ8N584 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TTC39CQ8N584 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TTC39CQ8N584 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TTC39CQ8N584 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.85■□□□□ 0.93
TTC39CQ8N584 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.85■□□□□ 0.93
TTC39CQ8N584 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
TTC39CQ8N584 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
TTC39CQ8N584 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TTC39CQ8N584 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TTC39CQ8N584 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.85■□□□□ 0.93
TTC39CQ8N584 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TTC39CQ8N584 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.84■□□□□ 0.93
TTC39CQ8N584 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.84■□□□□ 0.93
TTC39CQ8N584 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TTC39CQ8N584 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TTC39CQ8N584 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TTC39CQ8N584 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.84■□□□□ 0.93
TTC39CQ8N584 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TTC39CQ8N584 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.84■□□□□ 0.93
TTC39CQ8N584 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TTC39CQ8N584 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TTC39CQ8N584 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.84■□□□□ 0.93
TTC39CQ8N584 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TTC39CQ8N584 C1QL1P1-201ENST00000568105 661 ntBASIC20.84■□□□□ 0.93
TTC39CQ8N584 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TTC39CQ8N584 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.84■□□□□ 0.93
TTC39CQ8N584 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.84■□□□□ 0.93
TTC39CQ8N584 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TTC39CQ8N584 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.84■□□□□ 0.93
TTC39CQ8N584 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TTC39CQ8N584 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TTC39CQ8N584 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TTC39CQ8N584 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.84■□□□□ 0.93
TTC39CQ8N584 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TTC39CQ8N584 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TTC39CQ8N584 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TTC39CQ8N584 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
TTC39CQ8N584 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.84■□□□□ 0.93
TTC39CQ8N584 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TTC39CQ8N584 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.84■□□□□ 0.93
TTC39CQ8N584 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
TTC39CQ8N584 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TTC39CQ8N584 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.83■□□□□ 0.93
TTC39CQ8N584 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.83■□□□□ 0.93
TTC39CQ8N584 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TTC39CQ8N584 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
TTC39CQ8N584 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
TTC39CQ8N584 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TTC39CQ8N584 AL353807.1-201ENST00000427475 662 ntBASIC20.83■□□□□ 0.93
TTC39CQ8N584 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.83■□□□□ 0.93
TTC39CQ8N584 RARRES2P10-201ENST00000564312 460 ntBASIC20.83■□□□□ 0.93
TTC39CQ8N584 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.83■□□□□ 0.93
TTC39CQ8N584 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.83■□□□□ 0.93
TTC39CQ8N584 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.83■□□□□ 0.93
TTC39CQ8N584 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TTC39CQ8N584 AL135905.2-201ENST00000584934 1404 ntBASIC20.83■□□□□ 0.93
TTC39CQ8N584 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.83■□□□□ 0.92
TTC39CQ8N584 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TTC39CQ8N584 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.83■□□□□ 0.92
TTC39CQ8N584 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TTC39CQ8N584 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TTC39CQ8N584 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.83■□□□□ 0.92
TTC39CQ8N584 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
TTC39CQ8N584 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TTC39CQ8N584 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.83■□□□□ 0.92
TTC39CQ8N584 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
TTC39CQ8N584 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TTC39CQ8N584 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.82■□□□□ 0.92
TTC39CQ8N584 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TTC39CQ8N584 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TTC39CQ8N584 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TTC39CQ8N584 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TTC39CQ8N584 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TTC39CQ8N584 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TTC39CQ8N584 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TTC39CQ8N584 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.82■□□□□ 0.92
TTC39CQ8N584 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
TTC39CQ8N584 AC098590.1-201ENST00000468126 897 ntBASIC20.82■□□□□ 0.92
TTC39CQ8N584 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TTC39CQ8N584 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.82■□□□□ 0.92
TTC39CQ8N584 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.82■□□□□ 0.92
TTC39CQ8N584 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.82■□□□□ 0.92
TTC39CQ8N584 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.82■□□□□ 0.92
TTC39CQ8N584 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
TTC39CQ8N584 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TTC39CQ8N584 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TTC39CQ8N584 TREX1-205ENST00000625293 1783 ntBASIC20.82■□□□□ 0.92
TTC39CQ8N584 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TTC39CQ8N584 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
TTC39CQ8N584 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TTC39CQ8N584 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms