Protein–RNA interactions for Protein: Q8N4B4

FBXO39, F-box only protein 39, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO39Q8N4B4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
FBXO39Q8N4B4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FBXO39Q8N4B4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FBXO39Q8N4B4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
FBXO39Q8N4B4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FBXO39Q8N4B4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FBXO39Q8N4B4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FBXO39Q8N4B4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FBXO39Q8N4B4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FBXO39Q8N4B4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
FBXO39Q8N4B4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FBXO39Q8N4B4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.56■□□□□ 0.72
FBXO39Q8N4B4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.56■□□□□ 0.72
FBXO39Q8N4B4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FBXO39Q8N4B4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FBXO39Q8N4B4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
FBXO39Q8N4B4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.56■□□□□ 0.72
FBXO39Q8N4B4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.55■□□□□ 0.72
FBXO39Q8N4B4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
FBXO39Q8N4B4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.55■□□□□ 0.72
FBXO39Q8N4B4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
FBXO39Q8N4B4 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.55■□□□□ 0.72
FBXO39Q8N4B4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FBXO39Q8N4B4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FBXO39Q8N4B4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FBXO39Q8N4B4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FBXO39Q8N4B4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FBXO39Q8N4B4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FBXO39Q8N4B4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FBXO39Q8N4B4 ECEL1P3-201ENST00000427961 737 ntBASIC19.55■□□□□ 0.72
FBXO39Q8N4B4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FBXO39Q8N4B4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
FBXO39Q8N4B4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.55■□□□□ 0.72
FBXO39Q8N4B4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.55■□□□□ 0.72
FBXO39Q8N4B4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
FBXO39Q8N4B4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.55■□□□□ 0.72
FBXO39Q8N4B4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.55■□□□□ 0.72
FBXO39Q8N4B4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
FBXO39Q8N4B4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.55■□□□□ 0.72
FBXO39Q8N4B4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FBXO39Q8N4B4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FBXO39Q8N4B4 REXO1L12P-201ENST00000622156 912 ntBASIC19.55■□□□□ 0.72
FBXO39Q8N4B4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
FBXO39Q8N4B4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FBXO39Q8N4B4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.55■□□□□ 0.72
FBXO39Q8N4B4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FBXO39Q8N4B4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
FBXO39Q8N4B4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FBXO39Q8N4B4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FBXO39Q8N4B4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FBXO39Q8N4B4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
FBXO39Q8N4B4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FBXO39Q8N4B4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FBXO39Q8N4B4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FBXO39Q8N4B4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FBXO39Q8N4B4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.54■□□□□ 0.72
FBXO39Q8N4B4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
FBXO39Q8N4B4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
FBXO39Q8N4B4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FBXO39Q8N4B4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FBXO39Q8N4B4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FBXO39Q8N4B4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.54■□□□□ 0.72
FBXO39Q8N4B4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.54■□□□□ 0.72
FBXO39Q8N4B4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.54■□□□□ 0.72
FBXO39Q8N4B4 AL031963.3-201ENST00000606441 850 ntBASIC19.54■□□□□ 0.72
FBXO39Q8N4B4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FBXO39Q8N4B4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FBXO39Q8N4B4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FBXO39Q8N4B4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
FBXO39Q8N4B4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
FBXO39Q8N4B4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FBXO39Q8N4B4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FBXO39Q8N4B4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
FBXO39Q8N4B4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
FBXO39Q8N4B4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FBXO39Q8N4B4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FBXO39Q8N4B4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.53■□□□□ 0.72
FBXO39Q8N4B4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.53■□□□□ 0.72
FBXO39Q8N4B4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.53■□□□□ 0.72
FBXO39Q8N4B4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FBXO39Q8N4B4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FBXO39Q8N4B4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
FBXO39Q8N4B4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
FBXO39Q8N4B4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.53■□□□□ 0.72
FBXO39Q8N4B4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
FBXO39Q8N4B4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.53■□□□□ 0.72
FBXO39Q8N4B4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
FBXO39Q8N4B4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.53■□□□□ 0.72
FBXO39Q8N4B4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
FBXO39Q8N4B4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FBXO39Q8N4B4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FBXO39Q8N4B4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
FBXO39Q8N4B4 KRT8P20-201ENST00000423953 1409 ntBASIC19.52■□□□□ 0.72
FBXO39Q8N4B4 KRT16P6-202ENST00000425692 1426 ntBASIC19.52■□□□□ 0.72
FBXO39Q8N4B4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.52■□□□□ 0.72
FBXO39Q8N4B4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FBXO39Q8N4B4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
FBXO39Q8N4B4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
FBXO39Q8N4B4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
FBXO39Q8N4B4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms