Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AL512625.2-201ENST00000417533 625 ntBASIC20.64■□□□□ 0.89
CCDC50Q8IVM0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC50Q8IVM0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.64■□□□□ 0.89
CCDC50Q8IVM0 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC50Q8IVM0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC50Q8IVM0 AC005332.7-201ENST00000614046 2005 ntBASIC20.64■□□□□ 0.89
CCDC50Q8IVM0 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC50Q8IVM0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC50Q8IVM0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC50Q8IVM0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CCDC50Q8IVM0 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC50Q8IVM0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC50Q8IVM0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC50Q8IVM0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CCDC50Q8IVM0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC50Q8IVM0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC50Q8IVM0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC50Q8IVM0 TNXA-203ENST00000507684 2038 ntBASIC20.63■□□□□ 0.89
CCDC50Q8IVM0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC50Q8IVM0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC50Q8IVM0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC50Q8IVM0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC50Q8IVM0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC50Q8IVM0 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC50Q8IVM0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.63■□□□□ 0.89
CCDC50Q8IVM0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC50Q8IVM0 AC023632.3-201ENST00000521633 145 ntBASIC20.63■□□□□ 0.89
CCDC50Q8IVM0 AC080038.1-201ENST00000611274 1154 ntBASIC20.63■□□□□ 0.89
CCDC50Q8IVM0 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC50Q8IVM0 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC50Q8IVM0 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC50Q8IVM0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC50Q8IVM0 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC50Q8IVM0 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC50Q8IVM0 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC50Q8IVM0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC50Q8IVM0 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC50Q8IVM0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC50Q8IVM0 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC50Q8IVM0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC50Q8IVM0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CCDC50Q8IVM0 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC50Q8IVM0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.62■□□□□ 0.89
CCDC50Q8IVM0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC50Q8IVM0 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC50Q8IVM0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC50Q8IVM0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC50Q8IVM0 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC50Q8IVM0 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC50Q8IVM0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC50Q8IVM0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC50Q8IVM0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC50Q8IVM0 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.62■□□□□ 0.89
CCDC50Q8IVM0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC50Q8IVM0 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC50Q8IVM0 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC50Q8IVM0 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.62■□□□□ 0.89
CCDC50Q8IVM0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC50Q8IVM0 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC50Q8IVM0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC50Q8IVM0 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC50Q8IVM0 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC50Q8IVM0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC50Q8IVM0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.62■□□□□ 0.89
CCDC50Q8IVM0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC50Q8IVM0 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC50Q8IVM0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CCDC50Q8IVM0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CCDC50Q8IVM0 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
CCDC50Q8IVM0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CCDC50Q8IVM0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC50Q8IVM0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC50Q8IVM0 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC50Q8IVM0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CCDC50Q8IVM0 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC50Q8IVM0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC50Q8IVM0 AC020763.4-201ENST00000623414 4170 ntBASIC20.61■□□□□ 0.89
CCDC50Q8IVM0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC50Q8IVM0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.61■□□□□ 0.89
CCDC50Q8IVM0 MIR935-201ENST00000401179 91 ntBASIC20.61■□□□□ 0.89
CCDC50Q8IVM0 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CCDC50Q8IVM0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC50Q8IVM0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.61■□□□□ 0.89
CCDC50Q8IVM0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC50Q8IVM0 IKBKGP1-201ENST00000612193 1073 ntBASIC20.61■□□□□ 0.89
CCDC50Q8IVM0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC50Q8IVM0 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CCDC50Q8IVM0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC50Q8IVM0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
CCDC50Q8IVM0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC50Q8IVM0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC50Q8IVM0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC50Q8IVM0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
CCDC50Q8IVM0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC50Q8IVM0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC50Q8IVM0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC50Q8IVM0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC50Q8IVM0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC50Q8IVM0 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC50Q8IVM0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms