Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
TRIM50Q86XT4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM50Q86XT4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
TRIM50Q86XT4 AL691432.2-201ENST00000607222 2038 ntBASIC21.85■■□□□ 1.09
TRIM50Q86XT4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM50Q86XT4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
TRIM50Q86XT4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM50Q86XT4 FEM1AP1-201ENST00000431297 1995 ntBASIC21.85■■□□□ 1.09
TRIM50Q86XT4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM50Q86XT4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.85■■□□□ 1.09
TRIM50Q86XT4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM50Q86XT4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM50Q86XT4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
TRIM50Q86XT4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM50Q86XT4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.85■■□□□ 1.09
TRIM50Q86XT4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM50Q86XT4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM50Q86XT4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
TRIM50Q86XT4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM50Q86XT4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM50Q86XT4 FSCN1P1-201ENST00000568912 1481 ntBASIC21.84■■□□□ 1.09
TRIM50Q86XT4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM50Q86XT4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.84■■□□□ 1.09
TRIM50Q86XT4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM50Q86XT4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM50Q86XT4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.84■■□□□ 1.09
TRIM50Q86XT4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM50Q86XT4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.84■■□□□ 1.09
TRIM50Q86XT4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.84■■□□□ 1.09
TRIM50Q86XT4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.84■■□□□ 1.09
TRIM50Q86XT4 NAPSB-206ENST00000562112 1266 ntBASIC21.84■■□□□ 1.09
TRIM50Q86XT4 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.84■■□□□ 1.09
TRIM50Q86XT4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
TRIM50Q86XT4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.84■■□□□ 1.09
TRIM50Q86XT4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
TRIM50Q86XT4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM50Q86XT4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM50Q86XT4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.84■■□□□ 1.09
TRIM50Q86XT4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM50Q86XT4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.84■■□□□ 1.09
TRIM50Q86XT4 LINC01568-207ENST00000641790 1380 ntBASIC21.84■■□□□ 1.09
TRIM50Q86XT4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM50Q86XT4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM50Q86XT4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM50Q86XT4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM50Q86XT4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM50Q86XT4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.83■■□□□ 1.09
TRIM50Q86XT4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
TRIM50Q86XT4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM50Q86XT4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM50Q86XT4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM50Q86XT4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM50Q86XT4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.83■■□□□ 1.09
TRIM50Q86XT4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM50Q86XT4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM50Q86XT4 TMPOP1-202ENST00000424642 1267 ntBASIC21.83■■□□□ 1.09
TRIM50Q86XT4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.83■■□□□ 1.09
TRIM50Q86XT4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
TRIM50Q86XT4 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.83■■□□□ 1.09
TRIM50Q86XT4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM50Q86XT4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.83■■□□□ 1.09
TRIM50Q86XT4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
TRIM50Q86XT4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM50Q86XT4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
TRIM50Q86XT4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
TRIM50Q86XT4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
TRIM50Q86XT4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM50Q86XT4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.82■■□□□ 1.08
TRIM50Q86XT4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM50Q86XT4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM50Q86XT4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
TRIM50Q86XT4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM50Q86XT4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.82■■□□□ 1.08
TRIM50Q86XT4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM50Q86XT4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM50Q86XT4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.82■■□□□ 1.08
TRIM50Q86XT4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM50Q86XT4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.82■■□□□ 1.08
TRIM50Q86XT4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM50Q86XT4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.82■■□□□ 1.08
TRIM50Q86XT4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.82■■□□□ 1.08
TRIM50Q86XT4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.82■■□□□ 1.08
TRIM50Q86XT4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.82■■□□□ 1.08
TRIM50Q86XT4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.82■■□□□ 1.08
TRIM50Q86XT4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM50Q86XT4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM50Q86XT4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM50Q86XT4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.82■■□□□ 1.08
TRIM50Q86XT4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
TRIM50Q86XT4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.82■■□□□ 1.08
TRIM50Q86XT4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM50Q86XT4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM50Q86XT4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.82■■□□□ 1.08
TRIM50Q86XT4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM50Q86XT4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM50Q86XT4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM50Q86XT4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM50Q86XT4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.81■■□□□ 1.08
TRIM50Q86XT4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM50Q86XT4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms