Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
LDB1Q86U70 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LDB1Q86U70 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LDB1Q86U70 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LDB1Q86U70 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LDB1Q86U70 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LDB1Q86U70 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
LDB1Q86U70 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.54■□□□□ 0.72
LDB1Q86U70 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
LDB1Q86U70 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LDB1Q86U70 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LDB1Q86U70 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LDB1Q86U70 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.54■□□□□ 0.72
LDB1Q86U70 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.54■□□□□ 0.72
LDB1Q86U70 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.54■□□□□ 0.72
LDB1Q86U70 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
LDB1Q86U70 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.54■□□□□ 0.72
LDB1Q86U70 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.54■□□□□ 0.72
LDB1Q86U70 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.54■□□□□ 0.72
LDB1Q86U70 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LDB1Q86U70 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LDB1Q86U70 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
LDB1Q86U70 AC087289.5-201ENST00000586076 3175 ntBASIC19.54■□□□□ 0.72
LDB1Q86U70 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LDB1Q86U70 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
LDB1Q86U70 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LDB1Q86U70 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
LDB1Q86U70 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LDB1Q86U70 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
LDB1Q86U70 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
LDB1Q86U70 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.53■□□□□ 0.72
LDB1Q86U70 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.53■□□□□ 0.72
LDB1Q86U70 UNC93B4-201ENST00000505679 747 ntBASIC19.53■□□□□ 0.72
LDB1Q86U70 UNC93B5-201ENST00000530315 699 ntBASIC19.53■□□□□ 0.72
LDB1Q86U70 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.53■□□□□ 0.72
LDB1Q86U70 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.53■□□□□ 0.72
LDB1Q86U70 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.53■□□□□ 0.72
LDB1Q86U70 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LDB1Q86U70 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LDB1Q86U70 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
LDB1Q86U70 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LDB1Q86U70 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LDB1Q86U70 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
LDB1Q86U70 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.53■□□□□ 0.72
LDB1Q86U70 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LDB1Q86U70 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LDB1Q86U70 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.53■□□□□ 0.72
LDB1Q86U70 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LDB1Q86U70 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
LDB1Q86U70 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
LDB1Q86U70 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LDB1Q86U70 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LDB1Q86U70 Z82202.1-201ENST00000623446 1880 ntBASIC19.52■□□□□ 0.72
LDB1Q86U70 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
LDB1Q86U70 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LDB1Q86U70 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
LDB1Q86U70 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.52■□□□□ 0.72
LDB1Q86U70 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.52■□□□□ 0.72
LDB1Q86U70 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
LDB1Q86U70 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LDB1Q86U70 AC008403.3-201ENST00000598924 454 ntBASIC19.52■□□□□ 0.72
LDB1Q86U70 AC005332.7-201ENST00000614046 2005 ntBASIC19.52■□□□□ 0.72
LDB1Q86U70 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
LDB1Q86U70 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
LDB1Q86U70 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
LDB1Q86U70 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LDB1Q86U70 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LDB1Q86U70 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LDB1Q86U70 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LDB1Q86U70 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LDB1Q86U70 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LDB1Q86U70 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LDB1Q86U70 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.51■□□□□ 0.71
LDB1Q86U70 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LDB1Q86U70 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
LDB1Q86U70 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LDB1Q86U70 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.51■□□□□ 0.71
LDB1Q86U70 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.51■□□□□ 0.71
LDB1Q86U70 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.51■□□□□ 0.71
LDB1Q86U70 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LDB1Q86U70 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LDB1Q86U70 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.51■□□□□ 0.71
LDB1Q86U70 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.51■□□□□ 0.71
LDB1Q86U70 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.51■□□□□ 0.71
LDB1Q86U70 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LDB1Q86U70 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.51■□□□□ 0.71
LDB1Q86U70 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.51■□□□□ 0.71
LDB1Q86U70 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.51■□□□□ 0.71
LDB1Q86U70 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
LDB1Q86U70 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
LDB1Q86U70 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
LDB1Q86U70 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LDB1Q86U70 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LDB1Q86U70 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.51■□□□□ 0.71
LDB1Q86U70 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LDB1Q86U70 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LDB1Q86U70 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LDB1Q86U70 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LDB1Q86U70 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LDB1Q86U70 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms