Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 LINC01521-201ENST00000504184 1943 ntBASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 AC010203.1-204ENST00000548782 407 ntBASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 MYC-208ENST00000641036 567 ntBASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAI1Q7Z5J4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.75■□□□□ 0.27
RAI1Q7Z5J4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAI1Q7Z5J4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
RAI1Q7Z5J4 TSPY14P-201ENST00000303979 915 ntBASIC16.75■□□□□ 0.27
RAI1Q7Z5J4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAI1Q7Z5J4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAI1Q7Z5J4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.75■□□□□ 0.27
RAI1Q7Z5J4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.75■□□□□ 0.27
RAI1Q7Z5J4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.75■□□□□ 0.27
RAI1Q7Z5J4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
RAI1Q7Z5J4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.75■□□□□ 0.27
RAI1Q7Z5J4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAI1Q7Z5J4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAI1Q7Z5J4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAI1Q7Z5J4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAI1Q7Z5J4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAI1Q7Z5J4 AC096733.2-201ENST00000609937 1394 ntBASIC16.75■□□□□ 0.27
RAI1Q7Z5J4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAI1Q7Z5J4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.75■□□□□ 0.27
RAI1Q7Z5J4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAI1Q7Z5J4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.75■□□□□ 0.27
RAI1Q7Z5J4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
RAI1Q7Z5J4 AC099778.1-201ENST00000568593 1911 ntBASIC16.74■□□□□ 0.27
RAI1Q7Z5J4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.74■□□□□ 0.27
RAI1Q7Z5J4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.74■□□□□ 0.27
RAI1Q7Z5J4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.74■□□□□ 0.27
RAI1Q7Z5J4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.74■□□□□ 0.27
RAI1Q7Z5J4 TUBB8P6-201ENST00000436895 1288 ntBASIC16.74■□□□□ 0.27
RAI1Q7Z5J4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.74■□□□□ 0.27
RAI1Q7Z5J4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.74■□□□□ 0.27
RAI1Q7Z5J4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RAI1Q7Z5J4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAI1Q7Z5J4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAI1Q7Z5J4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAI1Q7Z5J4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAI1Q7Z5J4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAI1Q7Z5J4 AC104076.2-201ENST00000448912 469 ntBASIC16.74■□□□□ 0.27
RAI1Q7Z5J4 AC128688.1-201ENST00000487626 519 ntBASIC16.74■□□□□ 0.27
RAI1Q7Z5J4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.74■□□□□ 0.27
RAI1Q7Z5J4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.74■□□□□ 0.27
RAI1Q7Z5J4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.74■□□□□ 0.27
RAI1Q7Z5J4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAI1Q7Z5J4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAI1Q7Z5J4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.74■□□□□ 0.27
RAI1Q7Z5J4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.74■□□□□ 0.27
RAI1Q7Z5J4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAI1Q7Z5J4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RAI1Q7Z5J4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
RAI1Q7Z5J4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RAI1Q7Z5J4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
RAI1Q7Z5J4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAI1Q7Z5J4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAI1Q7Z5J4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAI1Q7Z5J4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAI1Q7Z5J4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAI1Q7Z5J4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAI1Q7Z5J4 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.73■□□□□ 0.27
RAI1Q7Z5J4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.73■□□□□ 0.27
RAI1Q7Z5J4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAI1Q7Z5J4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAI1Q7Z5J4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.73■□□□□ 0.27
RAI1Q7Z5J4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.73■□□□□ 0.27
RAI1Q7Z5J4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.73■□□□□ 0.27
RAI1Q7Z5J4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.73■□□□□ 0.27
RAI1Q7Z5J4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.73■□□□□ 0.27
RAI1Q7Z5J4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RAI1Q7Z5J4 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.73■□□□□ 0.27
RAI1Q7Z5J4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.73■□□□□ 0.27
RAI1Q7Z5J4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAI1Q7Z5J4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAI1Q7Z5J4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAI1Q7Z5J4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.73■□□□□ 0.27
RAI1Q7Z5J4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAI1Q7Z5J4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAI1Q7Z5J4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.73■□□□□ 0.27
RAI1Q7Z5J4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAI1Q7Z5J4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAI1Q7Z5J4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAI1Q7Z5J4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms