Protein–RNA interactions for Protein: Q6QNY0

BLOC1S3, Biogenesis of lysosome-related organelles complex 1 subunit 3, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S3Q6QNY0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BLOC1S3Q6QNY0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BLOC1S3Q6QNY0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BLOC1S3Q6QNY0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BLOC1S3Q6QNY0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BLOC1S3Q6QNY0 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.66■□□□□ 0.58
BLOC1S3Q6QNY0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
BLOC1S3Q6QNY0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.66■□□□□ 0.58
BLOC1S3Q6QNY0 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BLOC1S3Q6QNY0 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BLOC1S3Q6QNY0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
BLOC1S3Q6QNY0 AC141586.3-201ENST00000562166 1838 ntBASIC18.66■□□□□ 0.58
BLOC1S3Q6QNY0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BLOC1S3Q6QNY0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BLOC1S3Q6QNY0 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.66■□□□□ 0.58
BLOC1S3Q6QNY0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.66■□□□□ 0.58
BLOC1S3Q6QNY0 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BLOC1S3Q6QNY0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.66■□□□□ 0.58
BLOC1S3Q6QNY0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
BLOC1S3Q6QNY0 AC069236.1-201ENST00000604339 616 ntBASIC18.66■□□□□ 0.58
BLOC1S3Q6QNY0 AL589743.5-201ENST00000616611 1050 ntBASIC18.66■□□□□ 0.58
BLOC1S3Q6QNY0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BLOC1S3Q6QNY0 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.66■□□□□ 0.58
BLOC1S3Q6QNY0 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.66■□□□□ 0.58
BLOC1S3Q6QNY0 AL049812.1-201ENST00000432563 2267 ntBASIC18.66■□□□□ 0.58
BLOC1S3Q6QNY0 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BLOC1S3Q6QNY0 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BLOC1S3Q6QNY0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BLOC1S3Q6QNY0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BLOC1S3Q6QNY0 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BLOC1S3Q6QNY0 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BLOC1S3Q6QNY0 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BLOC1S3Q6QNY0 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.65■□□□□ 0.58
BLOC1S3Q6QNY0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
BLOC1S3Q6QNY0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BLOC1S3Q6QNY0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
BLOC1S3Q6QNY0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BLOC1S3Q6QNY0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
BLOC1S3Q6QNY0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
BLOC1S3Q6QNY0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
BLOC1S3Q6QNY0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
BLOC1S3Q6QNY0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
BLOC1S3Q6QNY0 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BLOC1S3Q6QNY0 AC116351.2-201ENST00000606540 1585 ntBASIC18.65■□□□□ 0.58
BLOC1S3Q6QNY0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
BLOC1S3Q6QNY0 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
BLOC1S3Q6QNY0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BLOC1S3Q6QNY0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.65■□□□□ 0.58
BLOC1S3Q6QNY0 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BLOC1S3Q6QNY0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.65■□□□□ 0.58
BLOC1S3Q6QNY0 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.65■□□□□ 0.58
BLOC1S3Q6QNY0 CYP2T1P-201ENST00000432607 1285 ntBASIC18.65■□□□□ 0.58
BLOC1S3Q6QNY0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.65■□□□□ 0.58
BLOC1S3Q6QNY0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
BLOC1S3Q6QNY0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
BLOC1S3Q6QNY0 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BLOC1S3Q6QNY0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
BLOC1S3Q6QNY0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.65■□□□□ 0.58
BLOC1S3Q6QNY0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BLOC1S3Q6QNY0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.65■□□□□ 0.58
BLOC1S3Q6QNY0 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BLOC1S3Q6QNY0 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BLOC1S3Q6QNY0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
BLOC1S3Q6QNY0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
BLOC1S3Q6QNY0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.64■□□□□ 0.58
BLOC1S3Q6QNY0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.64■□□□□ 0.58
BLOC1S3Q6QNY0 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
BLOC1S3Q6QNY0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.64■□□□□ 0.58
BLOC1S3Q6QNY0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
BLOC1S3Q6QNY0 AC006333.2-201ENST00000607957 2099 ntBASIC18.64■□□□□ 0.57
BLOC1S3Q6QNY0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BLOC1S3Q6QNY0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BLOC1S3Q6QNY0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BLOC1S3Q6QNY0 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
BLOC1S3Q6QNY0 TEX21P-204ENST00000641479 1693 ntBASIC18.64■□□□□ 0.57
BLOC1S3Q6QNY0 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BLOC1S3Q6QNY0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.64■□□□□ 0.57
BLOC1S3Q6QNY0 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
BLOC1S3Q6QNY0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BLOC1S3Q6QNY0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BLOC1S3Q6QNY0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
BLOC1S3Q6QNY0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.64■□□□□ 0.57
BLOC1S3Q6QNY0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.64■□□□□ 0.57
BLOC1S3Q6QNY0 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.64■□□□□ 0.57
BLOC1S3Q6QNY0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.64■□□□□ 0.57
BLOC1S3Q6QNY0 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.64■□□□□ 0.57
BLOC1S3Q6QNY0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.64■□□□□ 0.57
BLOC1S3Q6QNY0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BLOC1S3Q6QNY0 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.64■□□□□ 0.57
BLOC1S3Q6QNY0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BLOC1S3Q6QNY0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
BLOC1S3Q6QNY0 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
BLOC1S3Q6QNY0 AC010980.2-201ENST00000587099 1412 ntBASIC18.64■□□□□ 0.57
BLOC1S3Q6QNY0 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BLOC1S3Q6QNY0 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.64■□□□□ 0.57
BLOC1S3Q6QNY0 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
BLOC1S3Q6QNY0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
BLOC1S3Q6QNY0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
BLOC1S3Q6QNY0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BLOC1S3Q6QNY0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms