Protein–RNA interactions for Protein: Q5VTD9

GFI1B, Zinc finger protein Gfi-1b, humanhuman

Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1BQ5VTD9 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.3■□□□□ 0.04
GFI1BQ5VTD9 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
GFI1BQ5VTD9 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
GFI1BQ5VTD9 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.29■□□□□ 0.04
GFI1BQ5VTD9 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GFI1BQ5VTD9 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GFI1BQ5VTD9 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GFI1BQ5VTD9 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GFI1BQ5VTD9 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC15.29■□□□□ 0.04
GFI1BQ5VTD9 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GFI1BQ5VTD9 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.29■□□□□ 0.04
GFI1BQ5VTD9 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GFI1BQ5VTD9 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC15.29■□□□□ 0.04
GFI1BQ5VTD9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
GFI1BQ5VTD9 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GFI1BQ5VTD9 POU5F1P4-201ENST00000413175 1085 ntBASIC15.29■□□□□ 0.04
GFI1BQ5VTD9 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC15.29■□□□□ 0.04
GFI1BQ5VTD9 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC15.29■□□□□ 0.04
GFI1BQ5VTD9 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC15.29■□□□□ 0.04
GFI1BQ5VTD9 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC15.29■□□□□ 0.04
GFI1BQ5VTD9 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC15.29■□□□□ 0.04
GFI1BQ5VTD9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC15.29■□□□□ 0.04
GFI1BQ5VTD9 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GFI1BQ5VTD9 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
GFI1BQ5VTD9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.29■□□□□ 0.04
GFI1BQ5VTD9 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.29■□□□□ 0.04
GFI1BQ5VTD9 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
GFI1BQ5VTD9 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
GFI1BQ5VTD9 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GFI1BQ5VTD9 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GFI1BQ5VTD9 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GFI1BQ5VTD9 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
GFI1BQ5VTD9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GFI1BQ5VTD9 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GFI1BQ5VTD9 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
GFI1BQ5VTD9 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GFI1BQ5VTD9 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GFI1BQ5VTD9 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GFI1BQ5VTD9 AC124067.4-201ENST00000519691 2379 ntBASIC15.28■□□□□ 0.04
GFI1BQ5VTD9 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
GFI1BQ5VTD9 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GFI1BQ5VTD9 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GFI1BQ5VTD9 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.28■□□□□ 0.04
GFI1BQ5VTD9 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
GFI1BQ5VTD9 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GFI1BQ5VTD9 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GFI1BQ5VTD9 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GFI1BQ5VTD9 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GFI1BQ5VTD9 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
GFI1BQ5VTD9 JTB-203ENST00000368589 1216 ntTSL 2 BASIC15.28■□□□□ 0.04
GFI1BQ5VTD9 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GFI1BQ5VTD9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GFI1BQ5VTD9 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC15.28■□□□□ 0.04
GFI1BQ5VTD9 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC15.28■□□□□ 0.04
GFI1BQ5VTD9 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC15.28■□□□□ 0.04
GFI1BQ5VTD9 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC15.28■□□□□ 0.04
GFI1BQ5VTD9 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC15.28■□□□□ 0.04
GFI1BQ5VTD9 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GFI1BQ5VTD9 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
GFI1BQ5VTD9 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GFI1BQ5VTD9 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GFI1BQ5VTD9 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GFI1BQ5VTD9 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.28■□□□□ 0.04
GFI1BQ5VTD9 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
GFI1BQ5VTD9 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GFI1BQ5VTD9 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
GFI1BQ5VTD9 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
GFI1BQ5VTD9 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GFI1BQ5VTD9 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.27■□□□□ 0.04
GFI1BQ5VTD9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
GFI1BQ5VTD9 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GFI1BQ5VTD9 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GFI1BQ5VTD9 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GFI1BQ5VTD9 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
GFI1BQ5VTD9 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GFI1BQ5VTD9 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC15.27■□□□□ 0.04
GFI1BQ5VTD9 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GFI1BQ5VTD9 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.27■□□□□ 0.04
GFI1BQ5VTD9 AC138907.5-202ENST00000569484 235 ntBASIC15.27■□□□□ 0.04
GFI1BQ5VTD9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC15.27■□□□□ 0.04
GFI1BQ5VTD9 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
GFI1BQ5VTD9 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.27■□□□□ 0.03
GFI1BQ5VTD9 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GFI1BQ5VTD9 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
GFI1BQ5VTD9 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GFI1BQ5VTD9 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GFI1BQ5VTD9 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GFI1BQ5VTD9 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
GFI1BQ5VTD9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
GFI1BQ5VTD9 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GFI1BQ5VTD9 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GFI1BQ5VTD9 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GFI1BQ5VTD9 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GFI1BQ5VTD9 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC15.26■□□□□ 0.03
GFI1BQ5VTD9 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GFI1BQ5VTD9 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
GFI1BQ5VTD9 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
GFI1BQ5VTD9 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GFI1BQ5VTD9 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
GFI1BQ5VTD9 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms