Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRIF1Q5T3J3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
LRIF1Q5T3J3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRIF1Q5T3J3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
LRIF1Q5T3J3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRIF1Q5T3J3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.47■□□□□ 0.55
LRIF1Q5T3J3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRIF1Q5T3J3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.47■□□□□ 0.55
LRIF1Q5T3J3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
LRIF1Q5T3J3 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.47■□□□□ 0.55
LRIF1Q5T3J3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.47■□□□□ 0.55
LRIF1Q5T3J3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LRIF1Q5T3J3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRIF1Q5T3J3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRIF1Q5T3J3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.47■□□□□ 0.55
LRIF1Q5T3J3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRIF1Q5T3J3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRIF1Q5T3J3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRIF1Q5T3J3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRIF1Q5T3J3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.46■□□□□ 0.55
LRIF1Q5T3J3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LRIF1Q5T3J3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRIF1Q5T3J3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRIF1Q5T3J3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRIF1Q5T3J3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
LRIF1Q5T3J3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRIF1Q5T3J3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRIF1Q5T3J3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.46■□□□□ 0.55
LRIF1Q5T3J3 GPX1P1-201ENST00000388829 606 ntBASIC18.46■□□□□ 0.55
LRIF1Q5T3J3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRIF1Q5T3J3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRIF1Q5T3J3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.46■□□□□ 0.55
LRIF1Q5T3J3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.46■□□□□ 0.55
LRIF1Q5T3J3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.46■□□□□ 0.55
LRIF1Q5T3J3 CROCCP3-202ENST00000420820 1947 ntBASIC18.46■□□□□ 0.55
LRIF1Q5T3J3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.46■□□□□ 0.55
LRIF1Q5T3J3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.46■□□□□ 0.55
LRIF1Q5T3J3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRIF1Q5T3J3 TFP1-202ENST00000475455 1573 ntBASIC18.46■□□□□ 0.55
LRIF1Q5T3J3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRIF1Q5T3J3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRIF1Q5T3J3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRIF1Q5T3J3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRIF1Q5T3J3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
LRIF1Q5T3J3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRIF1Q5T3J3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.54
LRIF1Q5T3J3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.46■□□□□ 0.54
LRIF1Q5T3J3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
LRIF1Q5T3J3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRIF1Q5T3J3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRIF1Q5T3J3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.45■□□□□ 0.54
LRIF1Q5T3J3 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRIF1Q5T3J3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRIF1Q5T3J3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.45■□□□□ 0.54
LRIF1Q5T3J3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
LRIF1Q5T3J3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRIF1Q5T3J3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRIF1Q5T3J3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRIF1Q5T3J3 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
LRIF1Q5T3J3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
LRIF1Q5T3J3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
LRIF1Q5T3J3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.45■□□□□ 0.54
LRIF1Q5T3J3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRIF1Q5T3J3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRIF1Q5T3J3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRIF1Q5T3J3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
LRIF1Q5T3J3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRIF1Q5T3J3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRIF1Q5T3J3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRIF1Q5T3J3 AL161938.1-201ENST00000569833 2180 ntBASIC18.45■□□□□ 0.54
LRIF1Q5T3J3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRIF1Q5T3J3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.45■□□□□ 0.54
LRIF1Q5T3J3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRIF1Q5T3J3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRIF1Q5T3J3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
LRIF1Q5T3J3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.45■□□□□ 0.54
LRIF1Q5T3J3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRIF1Q5T3J3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRIF1Q5T3J3 AC141586.3-201ENST00000562166 1838 ntBASIC18.44■□□□□ 0.54
LRIF1Q5T3J3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
LRIF1Q5T3J3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRIF1Q5T3J3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRIF1Q5T3J3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
LRIF1Q5T3J3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRIF1Q5T3J3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRIF1Q5T3J3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRIF1Q5T3J3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRIF1Q5T3J3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRIF1Q5T3J3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.44■□□□□ 0.54
LRIF1Q5T3J3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.44■□□□□ 0.54
LRIF1Q5T3J3 AC026271.2-201ENST00000428091 497 ntBASIC18.44■□□□□ 0.54
LRIF1Q5T3J3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRIF1Q5T3J3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRIF1Q5T3J3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.44■□□□□ 0.54
LRIF1Q5T3J3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
LRIF1Q5T3J3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
LRIF1Q5T3J3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRIF1Q5T3J3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRIF1Q5T3J3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRIF1Q5T3J3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms