Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RBM48Q5RL73 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RBM48Q5RL73 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RBM48Q5RL73 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RBM48Q5RL73 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.88■□□□□ 0.45
RBM48Q5RL73 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RBM48Q5RL73 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RBM48Q5RL73 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RBM48Q5RL73 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RBM48Q5RL73 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.88■□□□□ 0.45
RBM48Q5RL73 KRT16P6-202ENST00000425692 1426 ntBASIC17.88■□□□□ 0.45
RBM48Q5RL73 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.88■□□□□ 0.45
RBM48Q5RL73 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
RBM48Q5RL73 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RBM48Q5RL73 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RBM48Q5RL73 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RBM48Q5RL73 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RBM48Q5RL73 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.87■□□□□ 0.45
RBM48Q5RL73 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RBM48Q5RL73 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RBM48Q5RL73 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RBM48Q5RL73 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RBM48Q5RL73 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RBM48Q5RL73 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RBM48Q5RL73 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.87■□□□□ 0.45
RBM48Q5RL73 AC141586.3-201ENST00000562166 1838 ntBASIC17.87■□□□□ 0.45
RBM48Q5RL73 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RBM48Q5RL73 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.87■□□□□ 0.45
RBM48Q5RL73 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.87■□□□□ 0.45
RBM48Q5RL73 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.87■□□□□ 0.45
RBM48Q5RL73 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.87■□□□□ 0.45
RBM48Q5RL73 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RBM48Q5RL73 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.87■□□□□ 0.45
RBM48Q5RL73 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RBM48Q5RL73 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RBM48Q5RL73 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
RBM48Q5RL73 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RBM48Q5RL73 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
RBM48Q5RL73 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.87■□□□□ 0.45
RBM48Q5RL73 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RBM48Q5RL73 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RBM48Q5RL73 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RBM48Q5RL73 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RBM48Q5RL73 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RBM48Q5RL73 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RBM48Q5RL73 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RBM48Q5RL73 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.86■□□□□ 0.45
RBM48Q5RL73 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RBM48Q5RL73 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.86■□□□□ 0.45
RBM48Q5RL73 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.86■□□□□ 0.45
RBM48Q5RL73 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RBM48Q5RL73 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
RBM48Q5RL73 AC138907.5-202ENST00000569484 235 ntBASIC17.86■□□□□ 0.45
RBM48Q5RL73 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RBM48Q5RL73 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.86■□□□□ 0.45
RBM48Q5RL73 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RBM48Q5RL73 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.86■□□□□ 0.45
RBM48Q5RL73 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RBM48Q5RL73 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.86■□□□□ 0.45
RBM48Q5RL73 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RBM48Q5RL73 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RBM48Q5RL73 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.86■□□□□ 0.45
RBM48Q5RL73 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.86■□□□□ 0.45
RBM48Q5RL73 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RBM48Q5RL73 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.86■□□□□ 0.45
RBM48Q5RL73 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RBM48Q5RL73 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.86■□□□□ 0.45
RBM48Q5RL73 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RBM48Q5RL73 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RBM48Q5RL73 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RBM48Q5RL73 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RBM48Q5RL73 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RBM48Q5RL73 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RBM48Q5RL73 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RBM48Q5RL73 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RBM48Q5RL73 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RBM48Q5RL73 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
RBM48Q5RL73 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RBM48Q5RL73 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RBM48Q5RL73 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.85■□□□□ 0.45
RBM48Q5RL73 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RBM48Q5RL73 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.85■□□□□ 0.45
RBM48Q5RL73 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.85■□□□□ 0.45
RBM48Q5RL73 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RBM48Q5RL73 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.85■□□□□ 0.45
RBM48Q5RL73 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.85■□□□□ 0.45
RBM48Q5RL73 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.85■□□□□ 0.45
RBM48Q5RL73 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RBM48Q5RL73 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RBM48Q5RL73 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
RBM48Q5RL73 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.84■□□□□ 0.45
RBM48Q5RL73 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RBM48Q5RL73 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.84■□□□□ 0.45
RBM48Q5RL73 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.84■□□□□ 0.45
RBM48Q5RL73 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RBM48Q5RL73 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RBM48Q5RL73 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RBM48Q5RL73 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.84■□□□□ 0.45
RBM48Q5RL73 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RBM48Q5RL73 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms