Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
FREM1Q5H8C1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
FREM1Q5H8C1 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
FREM1Q5H8C1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
FREM1Q5H8C1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FREM1Q5H8C1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FREM1Q5H8C1 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FREM1Q5H8C1 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.26■□□□□ 0.35
FREM1Q5H8C1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.26■□□□□ 0.35
FREM1Q5H8C1 REXO1L10P-201ENST00000615707 1290 ntBASIC17.26■□□□□ 0.35
FREM1Q5H8C1 REXO1L12P-201ENST00000622156 912 ntBASIC17.26■□□□□ 0.35
FREM1Q5H8C1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FREM1Q5H8C1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FREM1Q5H8C1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
FREM1Q5H8C1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FREM1Q5H8C1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FREM1Q5H8C1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
FREM1Q5H8C1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.26■□□□□ 0.35
FREM1Q5H8C1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FREM1Q5H8C1 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FREM1Q5H8C1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
FREM1Q5H8C1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FREM1Q5H8C1 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FREM1Q5H8C1 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.26■□□□□ 0.35
FREM1Q5H8C1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.26■□□□□ 0.35
FREM1Q5H8C1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.26■□□□□ 0.35
FREM1Q5H8C1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.26■□□□□ 0.35
FREM1Q5H8C1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.26■□□□□ 0.35
FREM1Q5H8C1 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FREM1Q5H8C1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
FREM1Q5H8C1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FREM1Q5H8C1 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FREM1Q5H8C1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FREM1Q5H8C1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.25■□□□□ 0.35
FREM1Q5H8C1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FREM1Q5H8C1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FREM1Q5H8C1 KSR1P1-201ENST00000446298 240 ntBASIC17.25■□□□□ 0.35
FREM1Q5H8C1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FREM1Q5H8C1 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FREM1Q5H8C1 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.25■□□□□ 0.35
FREM1Q5H8C1 AC073195.1-201ENST00000607241 877 ntBASIC17.25■□□□□ 0.35
FREM1Q5H8C1 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.25■□□□□ 0.35
FREM1Q5H8C1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FREM1Q5H8C1 KRT8P9-201ENST00000558927 1449 ntBASIC17.25■□□□□ 0.35
FREM1Q5H8C1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FREM1Q5H8C1 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
FREM1Q5H8C1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
FREM1Q5H8C1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.25■□□□□ 0.35
FREM1Q5H8C1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FREM1Q5H8C1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
FREM1Q5H8C1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
FREM1Q5H8C1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.25■□□□□ 0.35
FREM1Q5H8C1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FREM1Q5H8C1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.25■□□□□ 0.35
FREM1Q5H8C1 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
FREM1Q5H8C1 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FREM1Q5H8C1 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.25■□□□□ 0.35
FREM1Q5H8C1 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FREM1Q5H8C1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.24■□□□□ 0.35
FREM1Q5H8C1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.24■□□□□ 0.35
FREM1Q5H8C1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FREM1Q5H8C1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FREM1Q5H8C1 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
FREM1Q5H8C1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FREM1Q5H8C1 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.24■□□□□ 0.35
FREM1Q5H8C1 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FREM1Q5H8C1 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.24■□□□□ 0.35
FREM1Q5H8C1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.24■□□□□ 0.35
FREM1Q5H8C1 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.24■□□□□ 0.35
FREM1Q5H8C1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FREM1Q5H8C1 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FREM1Q5H8C1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FREM1Q5H8C1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FREM1Q5H8C1 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FREM1Q5H8C1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
FREM1Q5H8C1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FREM1Q5H8C1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FREM1Q5H8C1 AP003071.4-201ENST00000562276 1284 ntBASIC17.23■□□□□ 0.35
FREM1Q5H8C1 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.23■□□□□ 0.35
FREM1Q5H8C1 AP001412.1-201ENST00000608405 714 ntBASIC17.23■□□□□ 0.35
FREM1Q5H8C1 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FREM1Q5H8C1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
FREM1Q5H8C1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FREM1Q5H8C1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FREM1Q5H8C1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
FREM1Q5H8C1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.23■□□□□ 0.35
FREM1Q5H8C1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
FREM1Q5H8C1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FREM1Q5H8C1 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FREM1Q5H8C1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FREM1Q5H8C1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FREM1Q5H8C1 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FREM1Q5H8C1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
FREM1Q5H8C1 AL390955.1-201ENST00000428694 934 ntBASIC17.23■□□□□ 0.35
FREM1Q5H8C1 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.23■□□□□ 0.35
FREM1Q5H8C1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.23■□□□□ 0.35
FREM1Q5H8C1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FREM1Q5H8C1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FREM1Q5H8C1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
FREM1Q5H8C1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms