Protein–RNA interactions for Protein: Q56A73

SPIN4, Spindlin-4, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN4Q56A73 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SPIN4Q56A73 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SPIN4Q56A73 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SPIN4Q56A73 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SPIN4Q56A73 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.71■□□□□ 0.59
SPIN4Q56A73 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SPIN4Q56A73 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SPIN4Q56A73 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SPIN4Q56A73 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SPIN4Q56A73 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SPIN4Q56A73 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SPIN4Q56A73 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPIN4Q56A73 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPIN4Q56A73 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SPIN4Q56A73 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPIN4Q56A73 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SPIN4Q56A73 AIRN-201ENST00000601203 4374 ntBASIC18.7■□□□□ 0.58
SPIN4Q56A73 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.7■□□□□ 0.58
SPIN4Q56A73 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.7■□□□□ 0.58
SPIN4Q56A73 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.7■□□□□ 0.58
SPIN4Q56A73 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.7■□□□□ 0.58
SPIN4Q56A73 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.7■□□□□ 0.58
SPIN4Q56A73 AC083880.1-201ENST00000608266 535 ntBASIC18.7■□□□□ 0.58
SPIN4Q56A73 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.7■□□□□ 0.58
SPIN4Q56A73 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
SPIN4Q56A73 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.7■□□□□ 0.58
SPIN4Q56A73 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.7■□□□□ 0.58
SPIN4Q56A73 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPIN4Q56A73 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPIN4Q56A73 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SPIN4Q56A73 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.7■□□□□ 0.58
SPIN4Q56A73 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SPIN4Q56A73 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.7■□□□□ 0.58
SPIN4Q56A73 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPIN4Q56A73 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.7■□□□□ 0.58
SPIN4Q56A73 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SPIN4Q56A73 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.69■□□□□ 0.58
SPIN4Q56A73 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SPIN4Q56A73 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
SPIN4Q56A73 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SPIN4Q56A73 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPIN4Q56A73 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPIN4Q56A73 BX323043.1-201ENST00000641006 1765 ntBASIC18.69■□□□□ 0.58
SPIN4Q56A73 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPIN4Q56A73 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SPIN4Q56A73 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SPIN4Q56A73 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.69■□□□□ 0.58
SPIN4Q56A73 AC069152.1-201ENST00000438030 544 ntBASIC18.69■□□□□ 0.58
SPIN4Q56A73 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SPIN4Q56A73 AC098934.4-201ENST00000564127 592 ntBASIC18.69■□□□□ 0.58
SPIN4Q56A73 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SPIN4Q56A73 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
SPIN4Q56A73 AC124283.5-201ENST00000624661 1809 ntBASIC18.69■□□□□ 0.58
SPIN4Q56A73 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPIN4Q56A73 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SPIN4Q56A73 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SPIN4Q56A73 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.69■□□□□ 0.58
SPIN4Q56A73 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.68■□□□□ 0.58
SPIN4Q56A73 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SPIN4Q56A73 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SPIN4Q56A73 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.68■□□□□ 0.58
SPIN4Q56A73 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
SPIN4Q56A73 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPIN4Q56A73 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPIN4Q56A73 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SPIN4Q56A73 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPIN4Q56A73 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPIN4Q56A73 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.68■□□□□ 0.58
SPIN4Q56A73 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.68■□□□□ 0.58
SPIN4Q56A73 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.68■□□□□ 0.58
SPIN4Q56A73 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.68■□□□□ 0.58
SPIN4Q56A73 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SPIN4Q56A73 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.68■□□□□ 0.58
SPIN4Q56A73 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPIN4Q56A73 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.68■□□□□ 0.58
SPIN4Q56A73 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
SPIN4Q56A73 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPIN4Q56A73 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPIN4Q56A73 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.68■□□□□ 0.58
SPIN4Q56A73 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPIN4Q56A73 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SPIN4Q56A73 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPIN4Q56A73 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.67■□□□□ 0.58
SPIN4Q56A73 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.67■□□□□ 0.58
SPIN4Q56A73 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPIN4Q56A73 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SPIN4Q56A73 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPIN4Q56A73 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SPIN4Q56A73 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPIN4Q56A73 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SPIN4Q56A73 AC018445.3-201ENST00000624177 1945 ntBASIC18.67■□□□□ 0.58
SPIN4Q56A73 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPIN4Q56A73 AL032819.2-201ENST00000624543 2162 ntBASIC18.67■□□□□ 0.58
SPIN4Q56A73 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.67■□□□□ 0.58
SPIN4Q56A73 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.67■□□□□ 0.58
SPIN4Q56A73 AC142086.2-201ENST00000569753 217 ntBASIC18.67■□□□□ 0.58
SPIN4Q56A73 AC104771.1-201ENST00000603335 964 ntBASIC18.67■□□□□ 0.58
SPIN4Q56A73 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPIN4Q56A73 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPIN4Q56A73 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms