Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRFAM7AQ494W8 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHRFAM7AQ494W8 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.1■□□□□ 0.33
CHRFAM7AQ494W8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
CHRFAM7AQ494W8 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.1■□□□□ 0.33
CHRFAM7AQ494W8 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRFAM7AQ494W8 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRFAM7AQ494W8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRFAM7AQ494W8 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.1■□□□□ 0.33
CHRFAM7AQ494W8 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.1■□□□□ 0.33
CHRFAM7AQ494W8 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHRFAM7AQ494W8 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHRFAM7AQ494W8 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.1■□□□□ 0.33
CHRFAM7AQ494W8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.1■□□□□ 0.33
CHRFAM7AQ494W8 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.1■□□□□ 0.33
CHRFAM7AQ494W8 AC008403.3-201ENST00000598924 454 ntBASIC17.1■□□□□ 0.33
CHRFAM7AQ494W8 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRFAM7AQ494W8 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRFAM7AQ494W8 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRFAM7AQ494W8 AC116562.4-201ENST00000641316 2276 ntBASIC17.1■□□□□ 0.33
CHRFAM7AQ494W8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.1■□□□□ 0.33
CHRFAM7AQ494W8 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHRFAM7AQ494W8 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHRFAM7AQ494W8 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRFAM7AQ494W8 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRFAM7AQ494W8 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CHRFAM7AQ494W8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
CHRFAM7AQ494W8 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRFAM7AQ494W8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.09■□□□□ 0.33
CHRFAM7AQ494W8 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.09■□□□□ 0.33
CHRFAM7AQ494W8 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRFAM7AQ494W8 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.09■□□□□ 0.33
CHRFAM7AQ494W8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.09■□□□□ 0.33
CHRFAM7AQ494W8 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.09■□□□□ 0.33
CHRFAM7AQ494W8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRFAM7AQ494W8 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
CHRFAM7AQ494W8 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHRFAM7AQ494W8 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRFAM7AQ494W8 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CHRFAM7AQ494W8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRFAM7AQ494W8 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.09■□□□□ 0.33
CHRFAM7AQ494W8 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRFAM7AQ494W8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHRFAM7AQ494W8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRFAM7AQ494W8 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRFAM7AQ494W8 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRFAM7AQ494W8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHRFAM7AQ494W8 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.08■□□□□ 0.33
CHRFAM7AQ494W8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CHRFAM7AQ494W8 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CHRFAM7AQ494W8 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CHRFAM7AQ494W8 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
CHRFAM7AQ494W8 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CHRFAM7AQ494W8 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.08■□□□□ 0.33
CHRFAM7AQ494W8 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.08■□□□□ 0.33
CHRFAM7AQ494W8 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
CHRFAM7AQ494W8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.08■□□□□ 0.33
CHRFAM7AQ494W8 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHRFAM7AQ494W8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHRFAM7AQ494W8 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHRFAM7AQ494W8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CHRFAM7AQ494W8 AC020763.4-201ENST00000623414 4170 ntBASIC17.08■□□□□ 0.32
CHRFAM7AQ494W8 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.08■□□□□ 0.32
CHRFAM7AQ494W8 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHRFAM7AQ494W8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.08■□□□□ 0.32
CHRFAM7AQ494W8 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHRFAM7AQ494W8 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.08■□□□□ 0.32
CHRFAM7AQ494W8 AC245052.3-201ENST00000450182 901 ntBASIC17.08■□□□□ 0.32
CHRFAM7AQ494W8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHRFAM7AQ494W8 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHRFAM7AQ494W8 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.08■□□□□ 0.32
CHRFAM7AQ494W8 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.08■□□□□ 0.32
CHRFAM7AQ494W8 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.08■□□□□ 0.32
CHRFAM7AQ494W8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.08■□□□□ 0.32
CHRFAM7AQ494W8 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHRFAM7AQ494W8 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.08■□□□□ 0.32
CHRFAM7AQ494W8 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHRFAM7AQ494W8 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHRFAM7AQ494W8 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHRFAM7AQ494W8 AC018445.3-201ENST00000624177 1945 ntBASIC17.08■□□□□ 0.32
CHRFAM7AQ494W8 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHRFAM7AQ494W8 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CHRFAM7AQ494W8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHRFAM7AQ494W8 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHRFAM7AQ494W8 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHRFAM7AQ494W8 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHRFAM7AQ494W8 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHRFAM7AQ494W8 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.07■□□□□ 0.32
CHRFAM7AQ494W8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.07■□□□□ 0.32
CHRFAM7AQ494W8 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHRFAM7AQ494W8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.07■□□□□ 0.32
CHRFAM7AQ494W8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHRFAM7AQ494W8 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.07■□□□□ 0.32
CHRFAM7AQ494W8 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CHRFAM7AQ494W8 KRT18P21-201ENST00000515767 1272 ntBASIC17.07■□□□□ 0.32
CHRFAM7AQ494W8 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.07■□□□□ 0.32
CHRFAM7AQ494W8 Z99916.2-201ENST00000604037 246 ntBASIC17.07■□□□□ 0.32
CHRFAM7AQ494W8 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.07■□□□□ 0.32
CHRFAM7AQ494W8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHRFAM7AQ494W8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms