Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH17Q12864 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH17Q12864 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.79■□□□□ 0.76
CDH17Q12864 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH17Q12864 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDH17Q12864 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH17Q12864 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDH17Q12864 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.79■□□□□ 0.76
CDH17Q12864 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CDH17Q12864 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.79■□□□□ 0.76
CDH17Q12864 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.79■□□□□ 0.76
CDH17Q12864 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.79■□□□□ 0.76
CDH17Q12864 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CDH17Q12864 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH17Q12864 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CDH17Q12864 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CDH17Q12864 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDH17Q12864 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.79■□□□□ 0.76
CDH17Q12864 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CDH17Q12864 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.78■□□□□ 0.76
CDH17Q12864 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.78■□□□□ 0.76
CDH17Q12864 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CDH17Q12864 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH17Q12864 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH17Q12864 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.78■□□□□ 0.76
CDH17Q12864 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.78■□□□□ 0.76
CDH17Q12864 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDH17Q12864 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDH17Q12864 AC120498.8-201ENST00000614275 531 ntBASIC19.78■□□□□ 0.76
CDH17Q12864 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH17Q12864 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.78■□□□□ 0.76
CDH17Q12864 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH17Q12864 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH17Q12864 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.78■□□□□ 0.76
CDH17Q12864 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH17Q12864 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH17Q12864 Z82202.1-201ENST00000623446 1880 ntBASIC19.77■□□□□ 0.76
CDH17Q12864 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDH17Q12864 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH17Q12864 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH17Q12864 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CDH17Q12864 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.77■□□□□ 0.76
CDH17Q12864 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CDH17Q12864 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CDH17Q12864 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDH17Q12864 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CDH17Q12864 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH17Q12864 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.77■□□□□ 0.76
CDH17Q12864 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH17Q12864 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.77■□□□□ 0.76
CDH17Q12864 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH17Q12864 SOX15-203ENST00000570788 1093 ntBASIC19.77■□□□□ 0.76
CDH17Q12864 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDH17Q12864 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH17Q12864 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH17Q12864 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CDH17Q12864 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.77■□□□□ 0.76
CDH17Q12864 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CDH17Q12864 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CDH17Q12864 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CDH17Q12864 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CDH17Q12864 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDH17Q12864 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDH17Q12864 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH17Q12864 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDH17Q12864 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH17Q12864 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH17Q12864 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH17Q12864 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.76■□□□□ 0.75
CDH17Q12864 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH17Q12864 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.76■□□□□ 0.75
CDH17Q12864 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.76■□□□□ 0.75
CDH17Q12864 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH17Q12864 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH17Q12864 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH17Q12864 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH17Q12864 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CDH17Q12864 AL355802.2-201ENST00000402069 882 ntBASIC19.76■□□□□ 0.75
CDH17Q12864 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.76■□□□□ 0.75
CDH17Q12864 HLA-L-209ENST00000420110 1011 ntBASIC19.76■□□□□ 0.75
CDH17Q12864 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CDH17Q12864 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDH17Q12864 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.76■□□□□ 0.75
CDH17Q12864 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.76■□□□□ 0.75
CDH17Q12864 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDH17Q12864 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CDH17Q12864 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH17Q12864 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
CDH17Q12864 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
CDH17Q12864 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH17Q12864 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CDH17Q12864 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH17Q12864 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH17Q12864 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH17Q12864 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDH17Q12864 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.75■□□□□ 0.75
CDH17Q12864 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDH17Q12864 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH17Q12864 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH17Q12864 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms