Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH1Q08174 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH1Q08174 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH1Q08174 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
PCDH1Q08174 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDH1Q08174 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.9■□□□□ 0.62
PCDH1Q08174 AC008687.6-201ENST00000596318 630 ntBASIC18.9■□□□□ 0.62
PCDH1Q08174 AC093484.2-201ENST00000580996 2166 ntBASIC18.9■□□□□ 0.62
PCDH1Q08174 AC124283.5-201ENST00000624661 1809 ntBASIC18.9■□□□□ 0.62
PCDH1Q08174 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH1Q08174 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH1Q08174 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH1Q08174 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH1Q08174 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH1Q08174 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH1Q08174 AC005332.7-201ENST00000614046 2005 ntBASIC18.9■□□□□ 0.62
PCDH1Q08174 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PCDH1Q08174 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PCDH1Q08174 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH1Q08174 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
PCDH1Q08174 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH1Q08174 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH1Q08174 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH1Q08174 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH1Q08174 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH1Q08174 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH1Q08174 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.89■□□□□ 0.61
PCDH1Q08174 UNC93B5-201ENST00000530315 699 ntBASIC18.89■□□□□ 0.61
PCDH1Q08174 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.89■□□□□ 0.61
PCDH1Q08174 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
PCDH1Q08174 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDH1Q08174 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH1Q08174 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH1Q08174 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH1Q08174 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH1Q08174 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
PCDH1Q08174 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH1Q08174 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH1Q08174 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH1Q08174 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH1Q08174 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH1Q08174 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH1Q08174 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH1Q08174 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH1Q08174 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PCDH1Q08174 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH1Q08174 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH1Q08174 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PCDH1Q08174 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH1Q08174 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.88■□□□□ 0.61
PCDH1Q08174 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.88■□□□□ 0.61
PCDH1Q08174 YBX1P10-201ENST00000444752 975 ntBASIC18.88■□□□□ 0.61
PCDH1Q08174 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH1Q08174 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
PCDH1Q08174 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH1Q08174 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH1Q08174 SOX15-203ENST00000570788 1093 ntBASIC18.88■□□□□ 0.61
PCDH1Q08174 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
PCDH1Q08174 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH1Q08174 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH1Q08174 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PCDH1Q08174 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PCDH1Q08174 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH1Q08174 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH1Q08174 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH1Q08174 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH1Q08174 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDH1Q08174 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH1Q08174 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH1Q08174 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH1Q08174 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH1Q08174 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH1Q08174 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH1Q08174 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH1Q08174 AIRN-201ENST00000601203 4374 ntBASIC18.87■□□□□ 0.61
PCDH1Q08174 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH1Q08174 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH1Q08174 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PCDH1Q08174 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH1Q08174 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH1Q08174 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDH1Q08174 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDH1Q08174 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDH1Q08174 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDH1Q08174 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDH1Q08174 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH1Q08174 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH1Q08174 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDH1Q08174 AC116562.4-201ENST00000641316 2276 ntBASIC18.87■□□□□ 0.61
PCDH1Q08174 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH1Q08174 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDH1Q08174 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH1Q08174 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
PCDH1Q08174 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH1Q08174 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDH1Q08174 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH1Q08174 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH1Q08174 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH1Q08174 AL355802.2-201ENST00000402069 882 ntBASIC18.86■□□□□ 0.61
PCDH1Q08174 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms