Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBE3AQ05086 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.79■□□□□ 0.92
UBE3AQ05086 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
UBE3AQ05086 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
UBE3AQ05086 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
UBE3AQ05086 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
UBE3AQ05086 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBE3AQ05086 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.79■□□□□ 0.92
UBE3AQ05086 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.79■□□□□ 0.92
UBE3AQ05086 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBE3AQ05086 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBE3AQ05086 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.79■□□□□ 0.92
UBE3AQ05086 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
UBE3AQ05086 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
UBE3AQ05086 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.79■□□□□ 0.92
UBE3AQ05086 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.79■□□□□ 0.92
UBE3AQ05086 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.79■□□□□ 0.92
UBE3AQ05086 AC141257.4-201ENST00000634557 245 ntBASIC20.79■□□□□ 0.92
UBE3AQ05086 AC136944.6-201ENST00000634818 245 ntBASIC20.79■□□□□ 0.92
UBE3AQ05086 AC092720.2-201ENST00000602388 1665 ntBASIC20.79■□□□□ 0.92
UBE3AQ05086 AC006128.1-201ENST00000624704 1661 ntBASIC20.79■□□□□ 0.92
UBE3AQ05086 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBE3AQ05086 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBE3AQ05086 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.78■□□□□ 0.92
UBE3AQ05086 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UBE3AQ05086 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.78■□□□□ 0.92
UBE3AQ05086 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBE3AQ05086 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UBE3AQ05086 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.78■□□□□ 0.92
UBE3AQ05086 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBE3AQ05086 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.78■□□□□ 0.92
UBE3AQ05086 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.78■□□□□ 0.92
UBE3AQ05086 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBE3AQ05086 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.78■□□□□ 0.92
UBE3AQ05086 Z85996.1-201ENST00000494644 937 ntBASIC20.78■□□□□ 0.92
UBE3AQ05086 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.78■□□□□ 0.92
UBE3AQ05086 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.78■□□□□ 0.92
UBE3AQ05086 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.78■□□□□ 0.92
UBE3AQ05086 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
UBE3AQ05086 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.78■□□□□ 0.92
UBE3AQ05086 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBE3AQ05086 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBE3AQ05086 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBE3AQ05086 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
UBE3AQ05086 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
UBE3AQ05086 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
UBE3AQ05086 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UBE3AQ05086 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
UBE3AQ05086 TMEM179-206ENST00000616017 1645 ntBASIC20.78■□□□□ 0.92
UBE3AQ05086 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBE3AQ05086 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBE3AQ05086 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
UBE3AQ05086 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBE3AQ05086 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.77■□□□□ 0.92
UBE3AQ05086 CA15P1-201ENST00000481698 905 ntBASIC20.77■□□□□ 0.92
UBE3AQ05086 AL353719.1-201ENST00000566847 864 ntBASIC20.77■□□□□ 0.92
UBE3AQ05086 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.77■□□□□ 0.92
UBE3AQ05086 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.77■□□□□ 0.92
UBE3AQ05086 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.77■□□□□ 0.92
UBE3AQ05086 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.77■□□□□ 0.92
UBE3AQ05086 AL121956.5-201ENST00000625261 221 ntBASIC20.77■□□□□ 0.92
UBE3AQ05086 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBE3AQ05086 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.77■□□□□ 0.92
UBE3AQ05086 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
UBE3AQ05086 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBE3AQ05086 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
UBE3AQ05086 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.91
UBE3AQ05086 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.76■□□□□ 0.91
UBE3AQ05086 AC007225.1-201ENST00000566331 1836 ntBASIC20.76■□□□□ 0.91
UBE3AQ05086 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBE3AQ05086 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.76■□□□□ 0.91
UBE3AQ05086 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBE3AQ05086 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBE3AQ05086 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.76■□□□□ 0.91
UBE3AQ05086 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.76■□□□□ 0.91
UBE3AQ05086 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.76■□□□□ 0.91
UBE3AQ05086 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.76■□□□□ 0.91
UBE3AQ05086 HOMER2P1-201ENST00000455653 964 ntBASIC20.76■□□□□ 0.91
UBE3AQ05086 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.76■□□□□ 0.91
UBE3AQ05086 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.76■□□□□ 0.91
UBE3AQ05086 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.76■□□□□ 0.91
UBE3AQ05086 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
UBE3AQ05086 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.76■□□□□ 0.91
UBE3AQ05086 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UBE3AQ05086 KRT8P8-201ENST00000434750 1448 ntBASIC20.76■□□□□ 0.91
UBE3AQ05086 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBE3AQ05086 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
UBE3AQ05086 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBE3AQ05086 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UBE3AQ05086 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBE3AQ05086 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBE3AQ05086 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.75■□□□□ 0.91
UBE3AQ05086 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
UBE3AQ05086 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.75■□□□□ 0.91
UBE3AQ05086 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.75■□□□□ 0.91
UBE3AQ05086 AC009947.2-201ENST00000444014 672 ntBASIC20.75■□□□□ 0.91
UBE3AQ05086 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UBE3AQ05086 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.75■□□□□ 0.91
UBE3AQ05086 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.75■□□□□ 0.91
UBE3AQ05086 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms