Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
HIST1H1AQ02539 AL691432.2-201ENST00000607222 2038 ntBASIC14.97□□□□□ -0.01
HIST1H1AQ02539 AC125437.2-201ENST00000625180 2167 ntBASIC14.97□□□□□ -0.01
HIST1H1AQ02539 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HIST1H1AQ02539 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HIST1H1AQ02539 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HIST1H1AQ02539 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HIST1H1AQ02539 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
HIST1H1AQ02539 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
HIST1H1AQ02539 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HIST1H1AQ02539 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HIST1H1AQ02539 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
HIST1H1AQ02539 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
HIST1H1AQ02539 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
HIST1H1AQ02539 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HIST1H1AQ02539 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
HIST1H1AQ02539 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC14.96□□□□□ -0.01
HIST1H1AQ02539 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC14.96□□□□□ -0.01
HIST1H1AQ02539 AC100791.3-201ENST00000617619 330 ntBASIC14.96□□□□□ -0.01
HIST1H1AQ02539 AC231657.2-201ENST00000624556 255 ntBASIC14.96□□□□□ -0.01
HIST1H1AQ02539 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
HIST1H1AQ02539 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HIST1H1AQ02539 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HIST1H1AQ02539 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HIST1H1AQ02539 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HIST1H1AQ02539 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HIST1H1AQ02539 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
HIST1H1AQ02539 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
HIST1H1AQ02539 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14.96□□□□□ -0.02
HIST1H1AQ02539 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.02
HIST1H1AQ02539 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
HIST1H1AQ02539 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HIST1H1AQ02539 AC020916.1-201ENST00000587762 1774 ntBASIC14.96□□□□□ -0.02
HIST1H1AQ02539 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
HIST1H1AQ02539 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC14.95□□□□□ -0.02
HIST1H1AQ02539 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H1AQ02539 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC14.95□□□□□ -0.02
HIST1H1AQ02539 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H1AQ02539 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
HIST1H1AQ02539 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC14.95□□□□□ -0.02
HIST1H1AQ02539 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
HIST1H1AQ02539 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
HIST1H1AQ02539 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.95□□□□□ -0.02
HIST1H1AQ02539 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H1AQ02539 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC14.95□□□□□ -0.02
HIST1H1AQ02539 ME3-201ENST00000323418 1068 ntTSL 5 BASIC14.95□□□□□ -0.02
HIST1H1AQ02539 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC14.95□□□□□ -0.02
HIST1H1AQ02539 KRT18P68-201ENST00000392293 1000 ntBASIC14.95□□□□□ -0.02
HIST1H1AQ02539 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC14.95□□□□□ -0.02
HIST1H1AQ02539 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H1AQ02539 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC14.95□□□□□ -0.02
HIST1H1AQ02539 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC14.95□□□□□ -0.02
HIST1H1AQ02539 AC105020.6-201ENST00000621523 1217 ntBASIC14.95□□□□□ -0.02
HIST1H1AQ02539 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC14.95□□□□□ -0.02
HIST1H1AQ02539 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC14.95□□□□□ -0.02
HIST1H1AQ02539 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC14.95□□□□□ -0.02
HIST1H1AQ02539 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H1AQ02539 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H1AQ02539 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H1AQ02539 HTR7P1-202ENST00000624664 4411 ntBASIC14.95□□□□□ -0.02
HIST1H1AQ02539 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H1AQ02539 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H1AQ02539 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H1AQ02539 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H1AQ02539 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC14.95□□□□□ -0.02
HIST1H1AQ02539 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H1AQ02539 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H1AQ02539 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H1AQ02539 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.95□□□□□ -0.02
HIST1H1AQ02539 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1AQ02539 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC14.94□□□□□ -0.02
HIST1H1AQ02539 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1AQ02539 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC14.94□□□□□ -0.02
HIST1H1AQ02539 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1AQ02539 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1AQ02539 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1AQ02539 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1AQ02539 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1AQ02539 CD37-204ENST00000535669 1674 ntTSL 2 BASIC14.94□□□□□ -0.02
HIST1H1AQ02539 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1AQ02539 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1AQ02539 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC14.94□□□□□ -0.02
HIST1H1AQ02539 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC14.94□□□□□ -0.02
HIST1H1AQ02539 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1AQ02539 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1AQ02539 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1AQ02539 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1AQ02539 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC14.94□□□□□ -0.02
HIST1H1AQ02539 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC14.94□□□□□ -0.02
HIST1H1AQ02539 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1AQ02539 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1AQ02539 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1AQ02539 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC14.94□□□□□ -0.02
HIST1H1AQ02539 MDK-213ENST00000617138 635 ntTSL 2 BASIC14.94□□□□□ -0.02
HIST1H1AQ02539 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
HIST1H1AQ02539 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1AQ02539 LTB4R2-202ENST00000528054 3092 ntBASIC14.94□□□□□ -0.02
HIST1H1AQ02539 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1AQ02539 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.94□□□□□ -0.02
HIST1H1AQ02539 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms