Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCS1Q01581 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCS1Q01581 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCS1Q01581 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCS1Q01581 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.86■□□□□ 0.61
HMGCS1Q01581 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCS1Q01581 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.86■□□□□ 0.61
HMGCS1Q01581 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCS1Q01581 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCS1Q01581 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCS1Q01581 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.86■□□□□ 0.61
HMGCS1Q01581 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.86■□□□□ 0.61
HMGCS1Q01581 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.86■□□□□ 0.61
HMGCS1Q01581 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.86■□□□□ 0.61
HMGCS1Q01581 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.86■□□□□ 0.61
HMGCS1Q01581 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.86■□□□□ 0.61
HMGCS1Q01581 AC005829.2-201ENST00000571422 1056 ntBASIC18.86■□□□□ 0.61
HMGCS1Q01581 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HMGCS1Q01581 AC092118.2-201ENST00000613495 667 ntBASIC18.86■□□□□ 0.61
HMGCS1Q01581 AC006557.6-201ENST00000623071 864 ntBASIC18.86■□□□□ 0.61
HMGCS1Q01581 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCS1Q01581 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.86■□□□□ 0.61
HMGCS1Q01581 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCS1Q01581 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCS1Q01581 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCS1Q01581 BX323043.1-201ENST00000641006 1765 ntBASIC18.86■□□□□ 0.61
HMGCS1Q01581 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCS1Q01581 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.85■□□□□ 0.61
HMGCS1Q01581 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCS1Q01581 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HMGCS1Q01581 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCS1Q01581 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCS1Q01581 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.85■□□□□ 0.61
HMGCS1Q01581 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCS1Q01581 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCS1Q01581 AL390719.1-204ENST00000412397 1219 ntBASIC18.85■□□□□ 0.61
HMGCS1Q01581 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.85■□□□□ 0.61
HMGCS1Q01581 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCS1Q01581 AC091874.3-201ENST00000512672 1195 ntBASIC18.85■□□□□ 0.61
HMGCS1Q01581 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.85■□□□□ 0.61
HMGCS1Q01581 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.85■□□□□ 0.61
HMGCS1Q01581 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.85■□□□□ 0.61
HMGCS1Q01581 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
HMGCS1Q01581 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
HMGCS1Q01581 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCS1Q01581 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.85■□□□□ 0.61
HMGCS1Q01581 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.85■□□□□ 0.61
HMGCS1Q01581 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.85■□□□□ 0.61
HMGCS1Q01581 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.85■□□□□ 0.61
HMGCS1Q01581 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS1Q01581 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS1Q01581 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.84■□□□□ 0.61
HMGCS1Q01581 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.84■□□□□ 0.61
HMGCS1Q01581 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS1Q01581 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS1Q01581 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS1Q01581 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.84■□□□□ 0.61
HMGCS1Q01581 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.84■□□□□ 0.61
HMGCS1Q01581 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS1Q01581 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
HMGCS1Q01581 AC124283.5-201ENST00000624661 1809 ntBASIC18.84■□□□□ 0.61
HMGCS1Q01581 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
HMGCS1Q01581 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS1Q01581 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HMGCS1Q01581 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS1Q01581 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HMGCS1Q01581 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
HMGCS1Q01581 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
HMGCS1Q01581 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.84■□□□□ 0.61
HMGCS1Q01581 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.84■□□□□ 0.61
HMGCS1Q01581 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.84■□□□□ 0.61
HMGCS1Q01581 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.84■□□□□ 0.61
HMGCS1Q01581 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.84■□□□□ 0.61
HMGCS1Q01581 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS1Q01581 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.84■□□□□ 0.61
HMGCS1Q01581 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS1Q01581 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.84■□□□□ 0.61
HMGCS1Q01581 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS1Q01581 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.84■□□□□ 0.61
HMGCS1Q01581 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
HMGCS1Q01581 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS1Q01581 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS1Q01581 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS1Q01581 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCS1Q01581 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.83■□□□□ 0.61
HMGCS1Q01581 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.83■□□□□ 0.61
HMGCS1Q01581 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.83■□□□□ 0.61
HMGCS1Q01581 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HMGCS1Q01581 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
HMGCS1Q01581 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
HMGCS1Q01581 AL020996.1-203ENST00000536896 2307 ntBASIC18.83■□□□□ 0.61
HMGCS1Q01581 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HMGCS1Q01581 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
HMGCS1Q01581 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.83■□□□□ 0.6
HMGCS1Q01581 SLC29A4P1-201ENST00000398760 971 ntBASIC18.83■□□□□ 0.6
HMGCS1Q01581 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HMGCS1Q01581 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.83■□□□□ 0.6
HMGCS1Q01581 TSPY6P-201ENST00000448518 926 ntBASIC18.83■□□□□ 0.6
HMGCS1Q01581 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.83■□□□□ 0.6
HMGCS1Q01581 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms