Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.67■□□□□ 0.42
CDK5Q00535 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.67■□□□□ 0.42
CDK5Q00535 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5Q00535 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5Q00535 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CDK5Q00535 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.67■□□□□ 0.42
CDK5Q00535 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5Q00535 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5Q00535 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.67■□□□□ 0.42
CDK5Q00535 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.67■□□□□ 0.42
CDK5Q00535 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5Q00535 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5Q00535 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CDK5Q00535 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5Q00535 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5Q00535 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5Q00535 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CDK5Q00535 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CDK5Q00535 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5Q00535 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5Q00535 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.66■□□□□ 0.42
CDK5Q00535 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5Q00535 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5Q00535 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.66■□□□□ 0.42
CDK5Q00535 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
CDK5Q00535 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5Q00535 AC069236.1-201ENST00000604339 616 ntBASIC17.66■□□□□ 0.42
CDK5Q00535 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CDK5Q00535 TEX21P-204ENST00000641479 1693 ntBASIC17.66■□□□□ 0.42
CDK5Q00535 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5Q00535 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
CDK5Q00535 AL049812.1-201ENST00000432563 2267 ntBASIC17.66■□□□□ 0.42
CDK5Q00535 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5Q00535 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.66■□□□□ 0.42
CDK5Q00535 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5Q00535 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CDK5Q00535 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5Q00535 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5Q00535 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.66■□□□□ 0.42
CDK5Q00535 AC116351.2-201ENST00000606540 1585 ntBASIC17.66■□□□□ 0.42
CDK5Q00535 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CDK5Q00535 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.66■□□□□ 0.42
CDK5Q00535 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5Q00535 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CDK5Q00535 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5Q00535 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5Q00535 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5Q00535 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5Q00535 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5Q00535 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.65■□□□□ 0.42
CDK5Q00535 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5Q00535 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5Q00535 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5Q00535 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5Q00535 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.65■□□□□ 0.42
CDK5Q00535 AC137761.2-201ENST00000561729 223 ntBASIC17.65■□□□□ 0.42
CDK5Q00535 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.65■□□□□ 0.42
CDK5Q00535 AC145350.3-201ENST00000569033 163 ntBASIC17.65■□□□□ 0.42
CDK5Q00535 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.65■□□□□ 0.42
CDK5Q00535 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CDK5Q00535 AL589743.5-201ENST00000616611 1050 ntBASIC17.65■□□□□ 0.42
CDK5Q00535 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CDK5Q00535 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5Q00535 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.65■□□□□ 0.42
CDK5Q00535 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5Q00535 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5Q00535 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5Q00535 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5Q00535 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5Q00535 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5Q00535 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5Q00535 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CDK5Q00535 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5Q00535 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
CDK5Q00535 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.65■□□□□ 0.42
CDK5Q00535 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.65■□□□□ 0.42
CDK5Q00535 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CDK5Q00535 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
CDK5Q00535 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CDK5Q00535 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.42
CDK5Q00535 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5Q00535 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.64■□□□□ 0.41
CDK5Q00535 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CDK5Q00535 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5Q00535 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5Q00535 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CDK5Q00535 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.64■□□□□ 0.41
CDK5Q00535 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CDK5Q00535 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5Q00535 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.64■□□□□ 0.41
CDK5Q00535 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.64■□□□□ 0.41
CDK5Q00535 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.64■□□□□ 0.41
CDK5Q00535 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.64■□□□□ 0.41
CDK5Q00535 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CDK5Q00535 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5Q00535 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
CDK5Q00535 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CDK5Q00535 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5Q00535 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5Q00535 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms