Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
H3F3AP84243 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
H3F3AP84243 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
H3F3AP84243 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.53■□□□□ 0.4
H3F3AP84243 NBPF21P-201ENST00000425093 1451 ntBASIC17.53■□□□□ 0.4
H3F3AP84243 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
H3F3AP84243 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
H3F3AP84243 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
H3F3AP84243 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
H3F3AP84243 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.53■□□□□ 0.4
H3F3AP84243 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.53■□□□□ 0.4
H3F3AP84243 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.53■□□□□ 0.4
H3F3AP84243 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.53■□□□□ 0.4
H3F3AP84243 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
H3F3AP84243 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
H3F3AP84243 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.53■□□□□ 0.4
H3F3AP84243 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.53■□□□□ 0.4
H3F3AP84243 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
H3F3AP84243 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
H3F3AP84243 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.53■□□□□ 0.4
H3F3AP84243 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
H3F3AP84243 TREX1-205ENST00000625293 1783 ntBASIC17.53■□□□□ 0.4
H3F3AP84243 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
H3F3AP84243 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.53■□□□□ 0.4
H3F3AP84243 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.53■□□□□ 0.4
H3F3AP84243 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
H3F3AP84243 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
H3F3AP84243 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
H3F3AP84243 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
H3F3AP84243 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
H3F3AP84243 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
H3F3AP84243 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.52■□□□□ 0.4
H3F3AP84243 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
H3F3AP84243 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.52■□□□□ 0.4
H3F3AP84243 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
H3F3AP84243 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
H3F3AP84243 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
H3F3AP84243 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
H3F3AP84243 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.52■□□□□ 0.4
H3F3AP84243 AC239809.2-201ENST00000415381 517 ntBASIC17.52■□□□□ 0.4
H3F3AP84243 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
H3F3AP84243 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.52■□□□□ 0.4
H3F3AP84243 KRT18P16-201ENST00000510337 1294 ntBASIC17.52■□□□□ 0.4
H3F3AP84243 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.52■□□□□ 0.4
H3F3AP84243 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.52■□□□□ 0.4
H3F3AP84243 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
H3F3AP84243 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
H3F3AP84243 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
H3F3AP84243 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.52■□□□□ 0.39
H3F3AP84243 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
H3F3AP84243 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
H3F3AP84243 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.52■□□□□ 0.39
H3F3AP84243 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
H3F3AP84243 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
H3F3AP84243 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
H3F3AP84243 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
H3F3AP84243 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.52■□□□□ 0.39
H3F3AP84243 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.51■□□□□ 0.39
H3F3AP84243 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H3F3AP84243 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.51■□□□□ 0.39
H3F3AP84243 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H3F3AP84243 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.51■□□□□ 0.39
H3F3AP84243 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
H3F3AP84243 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H3F3AP84243 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
H3F3AP84243 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H3F3AP84243 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H3F3AP84243 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H3F3AP84243 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.51■□□□□ 0.39
H3F3AP84243 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.51■□□□□ 0.39
H3F3AP84243 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H3F3AP84243 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.51■□□□□ 0.39
H3F3AP84243 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
H3F3AP84243 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
H3F3AP84243 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.51■□□□□ 0.39
H3F3AP84243 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H3F3AP84243 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.51■□□□□ 0.39
H3F3AP84243 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.51■□□□□ 0.39
H3F3AP84243 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.51■□□□□ 0.39
H3F3AP84243 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
H3F3AP84243 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H3F3AP84243 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H3F3AP84243 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
H3F3AP84243 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.51■□□□□ 0.39
H3F3AP84243 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.51■□□□□ 0.39
H3F3AP84243 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H3F3AP84243 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H3F3AP84243 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.5■□□□□ 0.39
H3F3AP84243 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
H3F3AP84243 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
H3F3AP84243 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.5■□□□□ 0.39
H3F3AP84243 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H3F3AP84243 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
H3F3AP84243 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
H3F3AP84243 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H3F3AP84243 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.5■□□□□ 0.39
H3F3AP84243 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H3F3AP84243 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.5■□□□□ 0.39
H3F3AP84243 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.5■□□□□ 0.39
H3F3AP84243 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms