Protein–RNA interactions for Protein: P84022

SMAD3, Mothers against decapentaplegic homolog 3, humanhuman

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3P84022 ZNF444P1-201ENST00000559497 298 ntBASIC21.21■□□□□ 0.99
SMAD3P84022 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.21■□□□□ 0.99
SMAD3P84022 AL353719.1-201ENST00000566847 864 ntBASIC21.21■□□□□ 0.99
SMAD3P84022 AC111152.3-201ENST00000569699 673 ntBASIC21.21■□□□□ 0.99
SMAD3P84022 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMAD3P84022 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMAD3P84022 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMAD3P84022 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMAD3P84022 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMAD3P84022 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMAD3P84022 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.2■□□□□ 0.98
SMAD3P84022 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMAD3P84022 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMAD3P84022 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMAD3P84022 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.2■□□□□ 0.98
SMAD3P84022 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.2■□□□□ 0.98
SMAD3P84022 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMAD3P84022 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.2■□□□□ 0.98
SMAD3P84022 PRELID1P1-202ENST00000567272 903 ntBASIC21.2■□□□□ 0.98
SMAD3P84022 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SMAD3P84022 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.2■□□□□ 0.98
SMAD3P84022 MIR3652-201ENST00000579335 131 ntBASIC21.2■□□□□ 0.98
SMAD3P84022 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC21.2■□□□□ 0.98
SMAD3P84022 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMAD3P84022 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMAD3P84022 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SMAD3P84022 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.2■□□□□ 0.98
SMAD3P84022 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMAD3P84022 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMAD3P84022 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SMAD3P84022 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMAD3P84022 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMAD3P84022 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMAD3P84022 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.2■□□□□ 0.98
SMAD3P84022 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMAD3P84022 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMAD3P84022 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.19■□□□□ 0.98
SMAD3P84022 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMAD3P84022 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMAD3P84022 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMAD3P84022 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SMAD3P84022 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMAD3P84022 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMAD3P84022 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMAD3P84022 AL049796.1-201ENST00000565336 1766 ntBASIC21.19■□□□□ 0.98
SMAD3P84022 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SMAD3P84022 AL845331.1-201ENST00000424978 1190 ntBASIC21.19■□□□□ 0.98
SMAD3P84022 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.19■□□□□ 0.98
SMAD3P84022 YBX1P10-201ENST00000444752 975 ntBASIC21.19■□□□□ 0.98
SMAD3P84022 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.19■□□□□ 0.98
SMAD3P84022 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.19■□□□□ 0.98
SMAD3P84022 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMAD3P84022 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMAD3P84022 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMAD3P84022 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMAD3P84022 KRT8P45-201ENST00000414328 1447 ntBASIC21.19■□□□□ 0.98
SMAD3P84022 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.19■□□□□ 0.98
SMAD3P84022 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMAD3P84022 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.18■□□□□ 0.98
SMAD3P84022 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMAD3P84022 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMAD3P84022 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMAD3P84022 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMAD3P84022 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.18■□□□□ 0.98
SMAD3P84022 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMAD3P84022 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SMAD3P84022 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.18■□□□□ 0.98
SMAD3P84022 TUBB8P6-201ENST00000436895 1288 ntBASIC21.18■□□□□ 0.98
SMAD3P84022 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.18■□□□□ 0.98
SMAD3P84022 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.18■□□□□ 0.98
SMAD3P84022 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.18■□□□□ 0.98
SMAD3P84022 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.18■□□□□ 0.98
SMAD3P84022 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMAD3P84022 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.18■□□□□ 0.98
SMAD3P84022 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.18■□□□□ 0.98
SMAD3P84022 NPAP1P7-201ENST00000613027 823 ntBASIC21.18■□□□□ 0.98
SMAD3P84022 AC083849.1-201ENST00000615227 514 ntBASIC21.18■□□□□ 0.98
SMAD3P84022 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SMAD3P84022 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.18■□□□□ 0.98
SMAD3P84022 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.18■□□□□ 0.98
SMAD3P84022 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SMAD3P84022 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SMAD3P84022 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.17■□□□□ 0.98
SMAD3P84022 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.17■□□□□ 0.98
SMAD3P84022 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SMAD3P84022 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMAD3P84022 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.17■□□□□ 0.98
SMAD3P84022 CKBP1-201ENST00000565489 1086 ntBASIC21.17■□□□□ 0.98
SMAD3P84022 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
SMAD3P84022 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.17■□□□□ 0.98
SMAD3P84022 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.17■□□□□ 0.98
SMAD3P84022 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.17■□□□□ 0.98
SMAD3P84022 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.17■□□□□ 0.98
SMAD3P84022 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMAD3P84022 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMAD3P84022 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.17■□□□□ 0.98
SMAD3P84022 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
SMAD3P84022 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SMAD3P84022 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMAD3P84022 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms