Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
UBA52P62987 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBA52P62987 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBA52P62987 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
UBA52P62987 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBA52P62987 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBA52P62987 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
UBA52P62987 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.84■□□□□ 0.29
UBA52P62987 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.84■□□□□ 0.29
UBA52P62987 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBA52P62987 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.83■□□□□ 0.29
UBA52P62987 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
UBA52P62987 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
UBA52P62987 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBA52P62987 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UBA52P62987 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBA52P62987 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UBA52P62987 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBA52P62987 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UBA52P62987 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBA52P62987 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
UBA52P62987 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.83■□□□□ 0.28
UBA52P62987 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBA52P62987 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
UBA52P62987 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.83■□□□□ 0.28
UBA52P62987 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBA52P62987 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBA52P62987 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.83■□□□□ 0.28
UBA52P62987 GCSHP5-201ENST00000443090 522 ntBASIC16.83■□□□□ 0.28
UBA52P62987 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
UBA52P62987 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UBA52P62987 AC010980.2-201ENST00000587099 1412 ntBASIC16.83■□□□□ 0.28
UBA52P62987 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.83■□□□□ 0.28
UBA52P62987 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.83■□□□□ 0.28
UBA52P62987 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBA52P62987 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBA52P62987 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
UBA52P62987 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBA52P62987 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.82■□□□□ 0.28
UBA52P62987 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBA52P62987 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBA52P62987 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
UBA52P62987 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBA52P62987 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.82■□□□□ 0.28
UBA52P62987 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
UBA52P62987 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBA52P62987 RBM17P2-201ENST00000616397 1405 ntBASIC16.82■□□□□ 0.28
UBA52P62987 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.82■□□□□ 0.28
UBA52P62987 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.82■□□□□ 0.28
UBA52P62987 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBA52P62987 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBA52P62987 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.82■□□□□ 0.28
UBA52P62987 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.82■□□□□ 0.28
UBA52P62987 AC006058.3-201ENST00000606217 1069 ntBASIC16.82■□□□□ 0.28
UBA52P62987 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBA52P62987 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBA52P62987 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBA52P62987 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBA52P62987 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBA52P62987 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBA52P62987 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBA52P62987 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.82■□□□□ 0.28
UBA52P62987 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBA52P62987 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBA52P62987 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.82■□□□□ 0.28
UBA52P62987 FP700111.2-201ENST00000619190 1892 ntBASIC16.82■□□□□ 0.28
UBA52P62987 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
UBA52P62987 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBA52P62987 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBA52P62987 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBA52P62987 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBA52P62987 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBA52P62987 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
UBA52P62987 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBA52P62987 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBA52P62987 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBA52P62987 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBA52P62987 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
UBA52P62987 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBA52P62987 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBA52P62987 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
UBA52P62987 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBA52P62987 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBA52P62987 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBA52P62987 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBA52P62987 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.81■□□□□ 0.28
UBA52P62987 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
UBA52P62987 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.81■□□□□ 0.28
UBA52P62987 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.81■□□□□ 0.28
UBA52P62987 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.81■□□□□ 0.28
UBA52P62987 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
UBA52P62987 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.81■□□□□ 0.28
UBA52P62987 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.81■□□□□ 0.28
UBA52P62987 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.81■□□□□ 0.28
UBA52P62987 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBA52P62987 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.81■□□□□ 0.28
UBA52P62987 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBA52P62987 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBA52P62987 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBA52P62987 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms