Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP46P62068 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
USP46P62068 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP46P62068 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.61■□□□□ 0.89
USP46P62068 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
USP46P62068 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP46P62068 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.61■□□□□ 0.89
USP46P62068 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP46P62068 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.61■□□□□ 0.89
USP46P62068 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.61■□□□□ 0.89
USP46P62068 AC073912.3-201ENST00000624414 853 ntBASIC20.61■□□□□ 0.89
USP46P62068 CR392000.1-201ENST00000624770 1228 ntBASIC20.61■□□□□ 0.89
USP46P62068 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.61■□□□□ 0.89
USP46P62068 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.61■□□□□ 0.89
USP46P62068 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.61■□□□□ 0.89
USP46P62068 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP46P62068 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP46P62068 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
USP46P62068 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.6■□□□□ 0.89
USP46P62068 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP46P62068 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
USP46P62068 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP46P62068 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.6■□□□□ 0.89
USP46P62068 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP46P62068 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
USP46P62068 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
USP46P62068 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.6■□□□□ 0.89
USP46P62068 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.6■□□□□ 0.89
USP46P62068 AL355355.2-201ENST00000442321 338 ntBASIC20.6■□□□□ 0.89
USP46P62068 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.6■□□□□ 0.89
USP46P62068 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP46P62068 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
USP46P62068 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.6■□□□□ 0.89
USP46P62068 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.6■□□□□ 0.89
USP46P62068 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.6■□□□□ 0.89
USP46P62068 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP46P62068 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.6■□□□□ 0.89
USP46P62068 TMEM179-206ENST00000616017 1645 ntBASIC20.6■□□□□ 0.89
USP46P62068 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
USP46P62068 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP46P62068 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP46P62068 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.59■□□□□ 0.89
USP46P62068 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.59■□□□□ 0.89
USP46P62068 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP46P62068 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
USP46P62068 TUBB8P6-201ENST00000436895 1288 ntBASIC20.59■□□□□ 0.89
USP46P62068 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP46P62068 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.59■□□□□ 0.89
USP46P62068 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.59■□□□□ 0.89
USP46P62068 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.59■□□□□ 0.89
USP46P62068 REXO1L12P-201ENST00000622156 912 ntBASIC20.59■□□□□ 0.89
USP46P62068 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.59■□□□□ 0.89
USP46P62068 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP46P62068 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP46P62068 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP46P62068 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.59■□□□□ 0.89
USP46P62068 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
USP46P62068 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
USP46P62068 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.59■□□□□ 0.89
USP46P62068 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP46P62068 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP46P62068 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.59■□□□□ 0.89
USP46P62068 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP46P62068 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP46P62068 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP46P62068 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP46P62068 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
USP46P62068 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP46P62068 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP46P62068 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP46P62068 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
USP46P62068 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
USP46P62068 KSR1P1-201ENST00000446298 240 ntBASIC20.58■□□□□ 0.89
USP46P62068 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
USP46P62068 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
USP46P62068 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
USP46P62068 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.58■□□□□ 0.89
USP46P62068 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
USP46P62068 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.58■□□□□ 0.89
USP46P62068 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
USP46P62068 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP46P62068 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP46P62068 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP46P62068 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.58■□□□□ 0.88
USP46P62068 AP001271.2-201ENST00000624018 1556 ntBASIC20.58■□□□□ 0.88
USP46P62068 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
USP46P62068 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
USP46P62068 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
USP46P62068 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
USP46P62068 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP46P62068 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
USP46P62068 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP46P62068 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP46P62068 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP46P62068 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP46P62068 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP46P62068 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP46P62068 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP46P62068 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP46P62068 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms