Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP1S1P61966 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP1S1P61966 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP1S1P61966 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP1S1P61966 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
AP1S1P61966 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
AP1S1P61966 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.75■□□□□ 0.75
AP1S1P61966 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.75■□□□□ 0.75
AP1S1P61966 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
AP1S1P61966 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP1S1P61966 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
AP1S1P61966 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP1S1P61966 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
AP1S1P61966 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.75■□□□□ 0.75
AP1S1P61966 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP1S1P61966 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.75■□□□□ 0.75
AP1S1P61966 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.75■□□□□ 0.75
AP1S1P61966 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.75■□□□□ 0.75
AP1S1P61966 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.75■□□□□ 0.75
AP1S1P61966 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
AP1S1P61966 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP1S1P61966 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
AP1S1P61966 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP1S1P61966 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
AP1S1P61966 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.75■□□□□ 0.75
AP1S1P61966 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP1S1P61966 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP1S1P61966 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.75■□□□□ 0.75
AP1S1P61966 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.75■□□□□ 0.75
AP1S1P61966 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP1S1P61966 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP1S1P61966 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.74■□□□□ 0.75
AP1S1P61966 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
AP1S1P61966 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.74■□□□□ 0.75
AP1S1P61966 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
AP1S1P61966 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP1S1P61966 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
AP1S1P61966 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP1S1P61966 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP1S1P61966 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
AP1S1P61966 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP1S1P61966 AC012618.2-201ENST00000428058 849 ntBASIC19.74■□□□□ 0.75
AP1S1P61966 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.74■□□□□ 0.75
AP1S1P61966 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
AP1S1P61966 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
AP1S1P61966 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.74■□□□□ 0.75
AP1S1P61966 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP1S1P61966 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
AP1S1P61966 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
AP1S1P61966 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP1S1P61966 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.74■□□□□ 0.75
AP1S1P61966 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
AP1S1P61966 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.74■□□□□ 0.75
AP1S1P61966 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
AP1S1P61966 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP1S1P61966 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
AP1S1P61966 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP1S1P61966 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP1S1P61966 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.73■□□□□ 0.75
AP1S1P61966 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.73■□□□□ 0.75
AP1S1P61966 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP1S1P61966 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP1S1P61966 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP1S1P61966 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
AP1S1P61966 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.73■□□□□ 0.75
AP1S1P61966 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP1S1P61966 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
AP1S1P61966 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
AP1S1P61966 AC008550.1-201ENST00000511500 884 ntBASIC19.73■□□□□ 0.75
AP1S1P61966 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.73■□□□□ 0.75
AP1S1P61966 AL353708.3-201ENST00000610272 989 ntBASIC19.73■□□□□ 0.75
AP1S1P61966 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP1S1P61966 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP1S1P61966 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
AP1S1P61966 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP1S1P61966 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.73■□□□□ 0.75
AP1S1P61966 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.73■□□□□ 0.75
AP1S1P61966 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP1S1P61966 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.72■□□□□ 0.75
AP1S1P61966 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.72■□□□□ 0.75
AP1S1P61966 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
AP1S1P61966 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP1S1P61966 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
AP1S1P61966 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.72■□□□□ 0.75
AP1S1P61966 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
AP1S1P61966 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
AP1S1P61966 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.72■□□□□ 0.75
AP1S1P61966 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
AP1S1P61966 MIR718-201ENST00000390190 70 ntBASIC19.72■□□□□ 0.75
AP1S1P61966 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
AP1S1P61966 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.72■□□□□ 0.75
AP1S1P61966 AP002982.1-201ENST00000492365 877 ntBASIC19.72■□□□□ 0.75
AP1S1P61966 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
AP1S1P61966 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
AP1S1P61966 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
AP1S1P61966 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.72■□□□□ 0.75
AP1S1P61966 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.72■□□□□ 0.75
AP1S1P61966 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.72■□□□□ 0.75
AP1S1P61966 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.72■□□□□ 0.75
AP1S1P61966 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms