Protein–RNA interactions for Protein: P61018

RAB4B, Ras-related protein Rab-4B, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4BP61018 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB4BP61018 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.23■□□□□ 0.03
RAB4BP61018 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.23■□□□□ 0.03
RAB4BP61018 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB4BP61018 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15.23■□□□□ 0.03
RAB4BP61018 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB4BP61018 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB4BP61018 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB4BP61018 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB4BP61018 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RAB4BP61018 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RAB4BP61018 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB4BP61018 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB4BP61018 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB4BP61018 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB4BP61018 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RAB4BP61018 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB4BP61018 MIR3621-201ENST00000580529 85 ntBASIC15.23■□□□□ 0.03
RAB4BP61018 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC15.23■□□□□ 0.03
RAB4BP61018 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC15.23■□□□□ 0.03
RAB4BP61018 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
RAB4BP61018 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB4BP61018 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB4BP61018 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB4BP61018 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB4BP61018 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB4BP61018 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
RAB4BP61018 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB4BP61018 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC15.23■□□□□ 0.03
RAB4BP61018 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB4BP61018 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB4BP61018 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
RAB4BP61018 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RAB4BP61018 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB4BP61018 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB4BP61018 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
RAB4BP61018 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB4BP61018 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB4BP61018 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB4BP61018 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB4BP61018 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB4BP61018 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.22■□□□□ 0.03
RAB4BP61018 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB4BP61018 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB4BP61018 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RAB4BP61018 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB4BP61018 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
RAB4BP61018 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
RAB4BP61018 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB4BP61018 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB4BP61018 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB4BP61018 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.22■□□□□ 0.03
RAB4BP61018 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB4BP61018 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RAB4BP61018 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
RAB4BP61018 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
RAB4BP61018 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB4BP61018 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB4BP61018 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB4BP61018 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB4BP61018 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB4BP61018 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB4BP61018 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB4BP61018 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB4BP61018 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB4BP61018 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB4BP61018 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB4BP61018 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB4BP61018 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB4BP61018 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
RAB4BP61018 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB4BP61018 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB4BP61018 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB4BP61018 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB4BP61018 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB4BP61018 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB4BP61018 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB4BP61018 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB4BP61018 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB4BP61018 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB4BP61018 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
RAB4BP61018 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RAB4BP61018 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.21■□□□□ 0.02
RAB4BP61018 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.21■□□□□ 0.02
RAB4BP61018 AC093484.2-201ENST00000580996 2166 ntBASIC15.21■□□□□ 0.02
RAB4BP61018 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RAB4BP61018 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.02
RAB4BP61018 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RAB4BP61018 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RAB4BP61018 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB4BP61018 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB4BP61018 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB4BP61018 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.2■□□□□ 0.02
RAB4BP61018 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB4BP61018 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB4BP61018 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
RAB4BP61018 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.2■□□□□ 0.02
RAB4BP61018 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB4BP61018 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB4BP61018 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms