Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.5■□□□□ 0.39
CLRN1P58418 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CLRN1P58418 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLRN1P58418 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.5■□□□□ 0.39
CLRN1P58418 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.5■□□□□ 0.39
CLRN1P58418 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLRN1P58418 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLRN1P58418 SOX15-203ENST00000570788 1093 ntBASIC17.5■□□□□ 0.39
CLRN1P58418 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.5■□□□□ 0.39
CLRN1P58418 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.5■□□□□ 0.39
CLRN1P58418 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLRN1P58418 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLRN1P58418 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLRN1P58418 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLRN1P58418 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CLRN1P58418 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.5■□□□□ 0.39
CLRN1P58418 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLRN1P58418 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLRN1P58418 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CLRN1P58418 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CLRN1P58418 AC124283.5-201ENST00000624661 1809 ntBASIC17.49■□□□□ 0.39
CLRN1P58418 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLRN1P58418 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLRN1P58418 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLRN1P58418 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.49■□□□□ 0.39
CLRN1P58418 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.49■□□□□ 0.39
CLRN1P58418 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLRN1P58418 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLRN1P58418 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLRN1P58418 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.49■□□□□ 0.39
CLRN1P58418 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.49■□□□□ 0.39
CLRN1P58418 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.49■□□□□ 0.39
CLRN1P58418 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CLRN1P58418 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLRN1P58418 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLRN1P58418 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLRN1P58418 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLRN1P58418 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.48■□□□□ 0.39
CLRN1P58418 TREX1-205ENST00000625293 1783 ntBASIC17.48■□□□□ 0.39
CLRN1P58418 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLRN1P58418 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLRN1P58418 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLRN1P58418 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLRN1P58418 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.48■□□□□ 0.39
CLRN1P58418 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLRN1P58418 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.48■□□□□ 0.39
CLRN1P58418 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLRN1P58418 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.48■□□□□ 0.39
CLRN1P58418 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLRN1P58418 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.48■□□□□ 0.39
CLRN1P58418 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLRN1P58418 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLRN1P58418 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.48■□□□□ 0.39
CLRN1P58418 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CLRN1P58418 AL121906.2-201ENST00000621597 723 ntBASIC17.48■□□□□ 0.39
CLRN1P58418 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CLRN1P58418 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLRN1P58418 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLRN1P58418 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLRN1P58418 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.48■□□□□ 0.39
CLRN1P58418 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLRN1P58418 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLRN1P58418 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLRN1P58418 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.48■□□□□ 0.39
CLRN1P58418 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.48■□□□□ 0.39
CLRN1P58418 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.47■□□□□ 0.39
CLRN1P58418 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLRN1P58418 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLRN1P58418 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLRN1P58418 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLRN1P58418 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.47■□□□□ 0.39
CLRN1P58418 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CLRN1P58418 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CLRN1P58418 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLRN1P58418 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLRN1P58418 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.47■□□□□ 0.39
CLRN1P58418 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.47■□□□□ 0.39
CLRN1P58418 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.47■□□□□ 0.39
CLRN1P58418 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.47■□□□□ 0.39
CLRN1P58418 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.47■□□□□ 0.39
CLRN1P58418 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CLRN1P58418 TFP1-202ENST00000475455 1573 ntBASIC17.47■□□□□ 0.39
CLRN1P58418 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.47■□□□□ 0.39
CLRN1P58418 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLRN1P58418 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLRN1P58418 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.47■□□□□ 0.39
CLRN1P58418 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.47■□□□□ 0.39
CLRN1P58418 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLRN1P58418 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CLRN1P58418 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLRN1P58418 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLRN1P58418 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CLRN1P58418 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.47■□□□□ 0.39
CLRN1P58418 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLRN1P58418 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLRN1P58418 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLRN1P58418 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLRN1P58418 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.46■□□□□ 0.39
CLRN1P58418 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.46■□□□□ 0.39
CLRN1P58418 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms