Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PER3P56645 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
PER3P56645 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PER3P56645 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.09■□□□□ 0.49
PER3P56645 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PER3P56645 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PER3P56645 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PER3P56645 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PER3P56645 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PER3P56645 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PER3P56645 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.09■□□□□ 0.49
PER3P56645 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.09■□□□□ 0.49
PER3P56645 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.09■□□□□ 0.49
PER3P56645 AC092865.7-201ENST00000641832 219 ntBASIC18.09■□□□□ 0.49
PER3P56645 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PER3P56645 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PER3P56645 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PER3P56645 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.09■□□□□ 0.49
PER3P56645 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PER3P56645 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PER3P56645 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PER3P56645 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PER3P56645 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PER3P56645 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PER3P56645 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PER3P56645 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PER3P56645 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PER3P56645 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.08■□□□□ 0.49
PER3P56645 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
PER3P56645 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PER3P56645 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PER3P56645 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.08■□□□□ 0.48
PER3P56645 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.08■□□□□ 0.48
PER3P56645 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PER3P56645 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.08■□□□□ 0.48
PER3P56645 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.08■□□□□ 0.48
PER3P56645 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PER3P56645 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PER3P56645 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PER3P56645 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.07■□□□□ 0.48
PER3P56645 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PER3P56645 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.07■□□□□ 0.48
PER3P56645 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.07■□□□□ 0.48
PER3P56645 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.07■□□□□ 0.48
PER3P56645 AC005363.2-201ENST00000618631 242 ntBASIC18.07■□□□□ 0.48
PER3P56645 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.07■□□□□ 0.48
PER3P56645 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PER3P56645 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.07■□□□□ 0.48
PER3P56645 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.07■□□□□ 0.48
PER3P56645 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PER3P56645 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PER3P56645 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PER3P56645 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.07■□□□□ 0.48
PER3P56645 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.06■□□□□ 0.48
PER3P56645 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PER3P56645 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.06■□□□□ 0.48
PER3P56645 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PER3P56645 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
PER3P56645 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.06■□□□□ 0.48
PER3P56645 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PER3P56645 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.06■□□□□ 0.48
PER3P56645 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PER3P56645 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.06■□□□□ 0.48
PER3P56645 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PER3P56645 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PER3P56645 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PER3P56645 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PER3P56645 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PER3P56645 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.06■□□□□ 0.48
PER3P56645 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PER3P56645 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PER3P56645 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.06■□□□□ 0.48
PER3P56645 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PER3P56645 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.06■□□□□ 0.48
PER3P56645 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.06■□□□□ 0.48
PER3P56645 AL353708.3-201ENST00000610272 989 ntBASIC18.06■□□□□ 0.48
PER3P56645 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PER3P56645 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PER3P56645 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PER3P56645 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.06■□□□□ 0.48
PER3P56645 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PER3P56645 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.06■□□□□ 0.48
PER3P56645 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PER3P56645 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.06■□□□□ 0.48
PER3P56645 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PER3P56645 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.06■□□□□ 0.48
PER3P56645 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PER3P56645 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
PER3P56645 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PER3P56645 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.06■□□□□ 0.48
PER3P56645 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PER3P56645 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.06■□□□□ 0.48
PER3P56645 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PER3P56645 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PER3P56645 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PER3P56645 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PER3P56645 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PER3P56645 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PER3P56645 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PER3P56645 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms