Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
PEX3P56589 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PEX3P56589 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PEX3P56589 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PEX3P56589 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.61■■□□□ 1.05
PEX3P56589 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PEX3P56589 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
PEX3P56589 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.61■■□□□ 1.05
PEX3P56589 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.61■■□□□ 1.05
PEX3P56589 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PEX3P56589 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
PEX3P56589 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PEX3P56589 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PEX3P56589 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PEX3P56589 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.61■■□□□ 1.05
PEX3P56589 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PEX3P56589 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PEX3P56589 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.61■■□□□ 1.05
PEX3P56589 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PEX3P56589 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.61■■□□□ 1.05
PEX3P56589 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.61■■□□□ 1.05
PEX3P56589 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.61■■□□□ 1.05
PEX3P56589 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PEX3P56589 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.61■■□□□ 1.05
PEX3P56589 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PEX3P56589 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.61■■□□□ 1.05
PEX3P56589 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.61■■□□□ 1.05
PEX3P56589 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
PEX3P56589 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PEX3P56589 AP006294.2-201ENST00000641667 209 ntBASIC21.61■■□□□ 1.05
PEX3P56589 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
PEX3P56589 AFG3L1P-217ENST00000557444 2447 ntBASIC21.61■■□□□ 1.05
PEX3P56589 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PEX3P56589 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.61■■□□□ 1.05
PEX3P56589 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.6■■□□□ 1.05
PEX3P56589 HTR7P1-201ENST00000538670 1336 ntBASIC21.6■■□□□ 1.05
PEX3P56589 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.6■■□□□ 1.05
PEX3P56589 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PEX3P56589 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.6■■□□□ 1.05
PEX3P56589 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PEX3P56589 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PEX3P56589 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PEX3P56589 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PEX3P56589 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.6■■□□□ 1.05
PEX3P56589 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PEX3P56589 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.6■■□□□ 1.05
PEX3P56589 AC008550.1-201ENST00000511500 884 ntBASIC21.6■■□□□ 1.05
PEX3P56589 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.6■■□□□ 1.05
PEX3P56589 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.6■■□□□ 1.05
PEX3P56589 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PEX3P56589 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PEX3P56589 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PEX3P56589 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PEX3P56589 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PEX3P56589 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PEX3P56589 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.6■■□□□ 1.05
PEX3P56589 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PEX3P56589 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PEX3P56589 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PEX3P56589 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.59■■□□□ 1.05
PEX3P56589 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PEX3P56589 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.59■■□□□ 1.05
PEX3P56589 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.59■■□□□ 1.05
PEX3P56589 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PEX3P56589 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PEX3P56589 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
PEX3P56589 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.59■■□□□ 1.05
PEX3P56589 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.59■■□□□ 1.05
PEX3P56589 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PEX3P56589 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PEX3P56589 RARRES2P10-201ENST00000564312 460 ntBASIC21.59■■□□□ 1.05
PEX3P56589 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.59■■□□□ 1.05
PEX3P56589 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.59■■□□□ 1.05
PEX3P56589 AC125437.2-201ENST00000625180 2167 ntBASIC21.59■■□□□ 1.05
PEX3P56589 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PEX3P56589 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
PEX3P56589 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PEX3P56589 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.59■■□□□ 1.05
PEX3P56589 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PEX3P56589 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PEX3P56589 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PEX3P56589 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
PEX3P56589 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
PEX3P56589 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PEX3P56589 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.58■■□□□ 1.05
PEX3P56589 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PEX3P56589 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PEX3P56589 AC093827.2-201ENST00000512654 315 ntBASIC21.58■■□□□ 1.05
PEX3P56589 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PEX3P56589 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.58■■□□□ 1.05
PEX3P56589 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
PEX3P56589 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.58■■□□□ 1.05
PEX3P56589 Z99916.2-201ENST00000604037 246 ntBASIC21.58■■□□□ 1.05
PEX3P56589 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.58■■□□□ 1.04
PEX3P56589 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
PEX3P56589 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.58■■□□□ 1.04
PEX3P56589 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
PEX3P56589 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.58■■□□□ 1.04
PEX3P56589 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PEX3P56589 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms