Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
FOXG1P55316 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXG1P55316 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.21■□□□□ 0.35
FOXG1P55316 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXG1P55316 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXG1P55316 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXG1P55316 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXG1P55316 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXG1P55316 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
FOXG1P55316 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
FOXG1P55316 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FOXG1P55316 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FOXG1P55316 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXG1P55316 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.21■□□□□ 0.35
FOXG1P55316 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
FOXG1P55316 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXG1P55316 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.21■□□□□ 0.35
FOXG1P55316 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.21■□□□□ 0.35
FOXG1P55316 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FOXG1P55316 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FOXG1P55316 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.21■□□□□ 0.35
FOXG1P55316 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.21■□□□□ 0.35
FOXG1P55316 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.21■□□□□ 0.35
FOXG1P55316 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FOXG1P55316 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXG1P55316 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.21■□□□□ 0.35
FOXG1P55316 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
FOXG1P55316 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
FOXG1P55316 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.21■□□□□ 0.34
FOXG1P55316 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXG1P55316 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXG1P55316 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXG1P55316 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXG1P55316 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
FOXG1P55316 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.2■□□□□ 0.34
FOXG1P55316 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXG1P55316 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXG1P55316 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.2■□□□□ 0.34
FOXG1P55316 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXG1P55316 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.2■□□□□ 0.34
FOXG1P55316 TUBB8P6-201ENST00000436895 1288 ntBASIC17.2■□□□□ 0.34
FOXG1P55316 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FOXG1P55316 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.2■□□□□ 0.34
FOXG1P55316 AC233702.5-201ENST00000584107 538 ntBASIC17.2■□□□□ 0.34
FOXG1P55316 AC113410.3-201ENST00000623366 203 ntBASIC17.2■□□□□ 0.34
FOXG1P55316 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.2■□□□□ 0.34
FOXG1P55316 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.2■□□□□ 0.34
FOXG1P55316 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXG1P55316 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXG1P55316 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FOXG1P55316 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.2■□□□□ 0.34
FOXG1P55316 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.2■□□□□ 0.34
FOXG1P55316 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXG1P55316 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
FOXG1P55316 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FOXG1P55316 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
FOXG1P55316 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXG1P55316 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXG1P55316 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FOXG1P55316 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FOXG1P55316 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
FOXG1P55316 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.19■□□□□ 0.34
FOXG1P55316 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FOXG1P55316 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.19■□□□□ 0.34
FOXG1P55316 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.19■□□□□ 0.34
FOXG1P55316 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.19■□□□□ 0.34
FOXG1P55316 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.19■□□□□ 0.34
FOXG1P55316 C1QL1P1-201ENST00000568105 661 ntBASIC17.19■□□□□ 0.34
FOXG1P55316 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.19■□□□□ 0.34
FOXG1P55316 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.19■□□□□ 0.34
FOXG1P55316 AF186192.3-201ENST00000583427 947 ntBASIC17.19■□□□□ 0.34
FOXG1P55316 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
FOXG1P55316 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FOXG1P55316 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.19■□□□□ 0.34
FOXG1P55316 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FOXG1P55316 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXG1P55316 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.19■□□□□ 0.34
FOXG1P55316 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXG1P55316 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXG1P55316 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
FOXG1P55316 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXG1P55316 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXG1P55316 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXG1P55316 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXG1P55316 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXG1P55316 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXG1P55316 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.18■□□□□ 0.34
FOXG1P55316 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
FOXG1P55316 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXG1P55316 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.18■□□□□ 0.34
FOXG1P55316 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
FOXG1P55316 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXG1P55316 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
FOXG1P55316 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
FOXG1P55316 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
FOXG1P55316 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
FOXG1P55316 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
FOXG1P55316 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.18■□□□□ 0.34
FOXG1P55316 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
FOXG1P55316 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms