Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.93■□□□□ 0.94
RAD23BP54727 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RAD23BP54727 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RAD23BP54727 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
RAD23BP54727 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RAD23BP54727 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAD23BP54727 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAD23BP54727 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAD23BP54727 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RAD23BP54727 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RAD23BP54727 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
RAD23BP54727 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.92■□□□□ 0.94
RAD23BP54727 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RAD23BP54727 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAD23BP54727 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.92■□□□□ 0.94
RAD23BP54727 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.92■□□□□ 0.94
RAD23BP54727 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAD23BP54727 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RAD23BP54727 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.92■□□□□ 0.94
RAD23BP54727 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.92■□□□□ 0.94
RAD23BP54727 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RAD23BP54727 AC124016.1-201ENST00000609552 612 ntBASIC20.92■□□□□ 0.94
RAD23BP54727 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
RAD23BP54727 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.92■□□□□ 0.94
RAD23BP54727 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAD23BP54727 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RAD23BP54727 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAD23BP54727 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.92■□□□□ 0.94
RAD23BP54727 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAD23BP54727 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
RAD23BP54727 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAD23BP54727 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAD23BP54727 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.92■□□□□ 0.94
RAD23BP54727 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RAD23BP54727 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAD23BP54727 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAD23BP54727 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RAD23BP54727 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.91■□□□□ 0.94
RAD23BP54727 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAD23BP54727 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.91■□□□□ 0.94
RAD23BP54727 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RAD23BP54727 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RAD23BP54727 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAD23BP54727 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.91■□□□□ 0.94
RAD23BP54727 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.91■□□□□ 0.94
RAD23BP54727 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RAD23BP54727 KRASP1-201ENST00000407852 552 ntBASIC20.91■□□□□ 0.94
RAD23BP54727 NBPF21P-201ENST00000425093 1451 ntBASIC20.91■□□□□ 0.94
RAD23BP54727 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
RAD23BP54727 YBX1P10-201ENST00000444752 975 ntBASIC20.91■□□□□ 0.94
RAD23BP54727 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.91■□□□□ 0.94
RAD23BP54727 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.91■□□□□ 0.94
RAD23BP54727 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.91■□□□□ 0.94
RAD23BP54727 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.91■□□□□ 0.94
RAD23BP54727 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RAD23BP54727 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RAD23BP54727 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAD23BP54727 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAD23BP54727 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
RAD23BP54727 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAD23BP54727 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAD23BP54727 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RAD23BP54727 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.9■□□□□ 0.94
RAD23BP54727 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.9■□□□□ 0.94
RAD23BP54727 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAD23BP54727 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.9■□□□□ 0.94
RAD23BP54727 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
RAD23BP54727 AC239809.2-201ENST00000415381 517 ntBASIC20.9■□□□□ 0.94
RAD23BP54727 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.9■□□□□ 0.94
RAD23BP54727 AC133681.1-201ENST00000465482 601 ntBASIC20.9■□□□□ 0.94
RAD23BP54727 AC098590.1-201ENST00000468126 897 ntBASIC20.9■□□□□ 0.94
RAD23BP54727 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
RAD23BP54727 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.9■□□□□ 0.94
RAD23BP54727 RPPH1-201ENST00000516869 333 ntBASIC20.9■□□□□ 0.94
RAD23BP54727 C1QBPP2-201ENST00000528754 825 ntBASIC20.9■□□□□ 0.94
RAD23BP54727 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
RAD23BP54727 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.9■□□□□ 0.94
RAD23BP54727 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.9■□□□□ 0.94
RAD23BP54727 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.9■□□□□ 0.94
RAD23BP54727 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.9■□□□□ 0.94
RAD23BP54727 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAD23BP54727 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.9■□□□□ 0.94
RAD23BP54727 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RAD23BP54727 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
RAD23BP54727 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
RAD23BP54727 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RAD23BP54727 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RAD23BP54727 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RAD23BP54727 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.89■□□□□ 0.93
RAD23BP54727 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.89■□□□□ 0.93
RAD23BP54727 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.89■□□□□ 0.93
RAD23BP54727 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RAD23BP54727 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
RAD23BP54727 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.89■□□□□ 0.93
RAD23BP54727 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
RAD23BP54727 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.89■□□□□ 0.93
RAD23BP54727 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAD23BP54727 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAD23BP54727 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
RAD23BP54727 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms