Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.89■□□□□ 0.45
HMGA2P52926 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGA2P52926 AL049812.1-201ENST00000432563 2267 ntBASIC17.89■□□□□ 0.45
HMGA2P52926 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.89■□□□□ 0.45
HMGA2P52926 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HMGA2P52926 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGA2P52926 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HMGA2P52926 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGA2P52926 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
HMGA2P52926 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGA2P52926 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HMGA2P52926 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGA2P52926 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.89■□□□□ 0.45
HMGA2P52926 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGA2P52926 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGA2P52926 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.88■□□□□ 0.45
HMGA2P52926 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.88■□□□□ 0.45
HMGA2P52926 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
HMGA2P52926 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
HMGA2P52926 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGA2P52926 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HMGA2P52926 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.88■□□□□ 0.45
HMGA2P52926 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HMGA2P52926 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGA2P52926 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGA2P52926 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGA2P52926 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGA2P52926 AL512625.2-201ENST00000417533 625 ntBASIC17.88■□□□□ 0.45
HMGA2P52926 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.88■□□□□ 0.45
HMGA2P52926 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.88■□□□□ 0.45
HMGA2P52926 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HMGA2P52926 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.88■□□□□ 0.45
HMGA2P52926 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.88■□□□□ 0.45
HMGA2P52926 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.88■□□□□ 0.45
HMGA2P52926 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.88■□□□□ 0.45
HMGA2P52926 AC008694.1-202ENST00000636953 945 ntBASIC17.88■□□□□ 0.45
HMGA2P52926 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
HMGA2P52926 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HMGA2P52926 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HMGA2P52926 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.88■□□□□ 0.45
HMGA2P52926 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGA2P52926 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HMGA2P52926 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGA2P52926 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HMGA2P52926 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.88■□□□□ 0.45
HMGA2P52926 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.88■□□□□ 0.45
HMGA2P52926 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HMGA2P52926 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
HMGA2P52926 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGA2P52926 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HMGA2P52926 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.88■□□□□ 0.45
HMGA2P52926 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGA2P52926 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HMGA2P52926 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.87■□□□□ 0.45
HMGA2P52926 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGA2P52926 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.87■□□□□ 0.45
HMGA2P52926 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
HMGA2P52926 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGA2P52926 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
HMGA2P52926 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGA2P52926 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGA2P52926 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGA2P52926 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.87■□□□□ 0.45
HMGA2P52926 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.87■□□□□ 0.45
HMGA2P52926 CYP2T1P-201ENST00000432607 1285 ntBASIC17.87■□□□□ 0.45
HMGA2P52926 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.87■□□□□ 0.45
HMGA2P52926 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.87■□□□□ 0.45
HMGA2P52926 BID-214ENST00000617586 542 ntTSL 5 BASIC17.87■□□□□ 0.45
HMGA2P52926 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.87■□□□□ 0.45
HMGA2P52926 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGA2P52926 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGA2P52926 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
HMGA2P52926 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HMGA2P52926 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HMGA2P52926 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.87■□□□□ 0.45
HMGA2P52926 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.87■□□□□ 0.45
HMGA2P52926 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGA2P52926 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGA2P52926 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.87■□□□□ 0.45
HMGA2P52926 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
HMGA2P52926 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
HMGA2P52926 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGA2P52926 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.86■□□□□ 0.45
HMGA2P52926 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGA2P52926 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGA2P52926 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.86■□□□□ 0.45
HMGA2P52926 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.86■□□□□ 0.45
HMGA2P52926 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGA2P52926 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGA2P52926 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
HMGA2P52926 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.86■□□□□ 0.45
HMGA2P52926 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.86■□□□□ 0.45
HMGA2P52926 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HMGA2P52926 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.86■□□□□ 0.45
HMGA2P52926 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HMGA2P52926 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGA2P52926 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.86■□□□□ 0.45
HMGA2P52926 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGA2P52926 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.86■□□□□ 0.45
HMGA2P52926 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms