Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
ZNF140P52738 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF140P52738 Z82202.1-201ENST00000623446 1880 ntBASIC19.52■□□□□ 0.72
ZNF140P52738 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF140P52738 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF140P52738 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.52■□□□□ 0.72
ZNF140P52738 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF140P52738 AC093484.2-201ENST00000580996 2166 ntBASIC19.52■□□□□ 0.72
ZNF140P52738 AC116562.4-201ENST00000641316 2276 ntBASIC19.52■□□□□ 0.72
ZNF140P52738 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF140P52738 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF140P52738 AC128676.1-201ENST00000454392 318 ntBASIC19.52■□□□□ 0.72
ZNF140P52738 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF140P52738 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.52■□□□□ 0.72
ZNF140P52738 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.52■□□□□ 0.72
ZNF140P52738 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF140P52738 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF140P52738 NBPF21P-201ENST00000425093 1451 ntBASIC19.52■□□□□ 0.72
ZNF140P52738 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF140P52738 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF140P52738 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF140P52738 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ZNF140P52738 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
ZNF140P52738 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ZNF140P52738 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ZNF140P52738 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.52■□□□□ 0.71
ZNF140P52738 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
ZNF140P52738 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.51■□□□□ 0.71
ZNF140P52738 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
ZNF140P52738 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF140P52738 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.51■□□□□ 0.71
ZNF140P52738 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF140P52738 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
ZNF140P52738 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF140P52738 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF140P52738 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
ZNF140P52738 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF140P52738 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.51■□□□□ 0.71
ZNF140P52738 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF140P52738 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.51■□□□□ 0.71
ZNF140P52738 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.51■□□□□ 0.71
ZNF140P52738 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF140P52738 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.51■□□□□ 0.71
ZNF140P52738 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
ZNF140P52738 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.51■□□□□ 0.71
ZNF140P52738 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.51■□□□□ 0.71
ZNF140P52738 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF140P52738 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF140P52738 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF140P52738 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
ZNF140P52738 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF140P52738 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF140P52738 KRT8P8-201ENST00000434750 1448 ntBASIC19.51■□□□□ 0.71
ZNF140P52738 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF140P52738 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF140P52738 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF140P52738 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF140P52738 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.5■□□□□ 0.71
ZNF140P52738 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF140P52738 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF140P52738 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF140P52738 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF140P52738 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.5■□□□□ 0.71
ZNF140P52738 TSPY20P-201ENST00000450910 630 ntBASIC19.5■□□□□ 0.71
ZNF140P52738 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.5■□□□□ 0.71
ZNF140P52738 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.5■□□□□ 0.71
ZNF140P52738 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF140P52738 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.5■□□□□ 0.71
ZNF140P52738 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
ZNF140P52738 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.5■□□□□ 0.71
ZNF140P52738 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.5■□□□□ 0.71
ZNF140P52738 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.5■□□□□ 0.71
ZNF140P52738 AL023875.1-201ENST00000640777 796 ntBASIC19.5■□□□□ 0.71
ZNF140P52738 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.5■□□□□ 0.71
ZNF140P52738 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.5■□□□□ 0.71
ZNF140P52738 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF140P52738 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF140P52738 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF140P52738 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF140P52738 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF140P52738 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
ZNF140P52738 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
ZNF140P52738 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF140P52738 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF140P52738 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF140P52738 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
ZNF140P52738 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
ZNF140P52738 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.49■□□□□ 0.71
ZNF140P52738 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.49■□□□□ 0.71
ZNF140P52738 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF140P52738 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.49■□□□□ 0.71
ZNF140P52738 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF140P52738 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF140P52738 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF140P52738 AC239809.2-201ENST00000415381 517 ntBASIC19.49■□□□□ 0.71
ZNF140P52738 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.49■□□□□ 0.71
ZNF140P52738 TUBB8P6-201ENST00000436895 1288 ntBASIC19.49■□□□□ 0.71
ZNF140P52738 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.49■□□□□ 0.71
ZNF140P52738 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.49■□□□□ 0.71
ZNF140P52738 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms