Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.23■□□□□ 0.67
CLCNKAP51800 AIRN-201ENST00000601203 4374 ntBASIC19.23■□□□□ 0.67
CLCNKAP51800 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCNKAP51800 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCNKAP51800 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLCNKAP51800 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCNKAP51800 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCNKAP51800 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.22■□□□□ 0.67
CLCNKAP51800 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.22■□□□□ 0.67
CLCNKAP51800 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCNKAP51800 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLCNKAP51800 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCNKAP51800 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.22■□□□□ 0.67
CLCNKAP51800 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CLCNKAP51800 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCNKAP51800 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCNKAP51800 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.22■□□□□ 0.67
CLCNKAP51800 TUBB8P6-201ENST00000436895 1288 ntBASIC19.22■□□□□ 0.67
CLCNKAP51800 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.22■□□□□ 0.67
CLCNKAP51800 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.22■□□□□ 0.67
CLCNKAP51800 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.22■□□□□ 0.67
CLCNKAP51800 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLCNKAP51800 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCNKAP51800 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.22■□□□□ 0.67
CLCNKAP51800 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CLCNKAP51800 AC009237.14-201ENST00000609975 1594 ntBASIC19.22■□□□□ 0.67
CLCNKAP51800 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CLCNKAP51800 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCNKAP51800 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCNKAP51800 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLCNKAP51800 KRT17P2-201ENST00000300992 1314 ntBASIC19.22■□□□□ 0.67
CLCNKAP51800 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLCNKAP51800 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CLCNKAP51800 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.22■□□□□ 0.67
CLCNKAP51800 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCNKAP51800 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLCNKAP51800 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCNKAP51800 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CLCNKAP51800 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.21■□□□□ 0.67
CLCNKAP51800 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCNKAP51800 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.21■□□□□ 0.67
CLCNKAP51800 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.21■□□□□ 0.67
CLCNKAP51800 AP002982.1-201ENST00000492365 877 ntBASIC19.21■□□□□ 0.67
CLCNKAP51800 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.21■□□□□ 0.67
CLCNKAP51800 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
CLCNKAP51800 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.21■□□□□ 0.67
CLCNKAP51800 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLCNKAP51800 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLCNKAP51800 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.21■□□□□ 0.67
CLCNKAP51800 PCDHAC2-203ENST00000615316 3011 ntBASIC19.21■□□□□ 0.67
CLCNKAP51800 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCNKAP51800 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.2■□□□□ 0.66
CLCNKAP51800 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCNKAP51800 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCNKAP51800 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLCNKAP51800 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.2■□□□□ 0.66
CLCNKAP51800 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCNKAP51800 NIFKP9-201ENST00000419265 221 ntBASIC19.2■□□□□ 0.66
CLCNKAP51800 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.2■□□□□ 0.66
CLCNKAP51800 KSR1P1-201ENST00000446298 240 ntBASIC19.2■□□□□ 0.66
CLCNKAP51800 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.2■□□□□ 0.66
CLCNKAP51800 MIR4785-201ENST00000585005 73 ntBASIC19.2■□□□□ 0.66
CLCNKAP51800 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.2■□□□□ 0.66
CLCNKAP51800 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.2■□□□□ 0.66
CLCNKAP51800 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCNKAP51800 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCNKAP51800 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCNKAP51800 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCNKAP51800 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLCNKAP51800 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLCNKAP51800 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCNKAP51800 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCNKAP51800 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCNKAP51800 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCNKAP51800 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCNKAP51800 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCNKAP51800 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLCNKAP51800 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCNKAP51800 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLCNKAP51800 TMEM179-206ENST00000616017 1645 ntBASIC19.19■□□□□ 0.66
CLCNKAP51800 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCNKAP51800 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCNKAP51800 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLCNKAP51800 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLCNKAP51800 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.19■□□□□ 0.66
CLCNKAP51800 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.19■□□□□ 0.66
CLCNKAP51800 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.19■□□□□ 0.66
CLCNKAP51800 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.19■□□□□ 0.66
CLCNKAP51800 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.19■□□□□ 0.66
CLCNKAP51800 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CLCNKAP51800 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLCNKAP51800 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.19■□□□□ 0.66
CLCNKAP51800 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCNKAP51800 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.19■□□□□ 0.66
CLCNKAP51800 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.19■□□□□ 0.66
CLCNKAP51800 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CLCNKAP51800 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CLCNKAP51800 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLCNKAP51800 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLCNKAP51800 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms