Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 PHGDH-210ENST00000641115 1638 ntBASIC17.12■□□□□ 0.33
HCFC1P51610 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC1P51610 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC1P51610 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.12■□□□□ 0.33
HCFC1P51610 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.12■□□□□ 0.33
HCFC1P51610 SLC25A1P4-201ENST00000567977 778 ntBASIC17.12■□□□□ 0.33
HCFC1P51610 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
HCFC1P51610 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC1P51610 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HCFC1P51610 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HCFC1P51610 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC1P51610 FP700111.2-201ENST00000619190 1892 ntBASIC17.12■□□□□ 0.33
HCFC1P51610 PLK5-205ENST00000642079 1969 ntBASIC17.12■□□□□ 0.33
HCFC1P51610 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC1P51610 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC1P51610 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC1P51610 AC006128.1-201ENST00000624704 1661 ntBASIC17.11■□□□□ 0.33
HCFC1P51610 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC1P51610 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.11■□□□□ 0.33
HCFC1P51610 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HCFC1P51610 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC1P51610 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC1P51610 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC1P51610 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC1P51610 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC1P51610 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.11■□□□□ 0.33
HCFC1P51610 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.11■□□□□ 0.33
HCFC1P51610 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC1P51610 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC1P51610 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC1P51610 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC1P51610 FAM207BP-201ENST00000447172 505 ntBASIC17.11■□□□□ 0.33
HCFC1P51610 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HCFC1P51610 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.11■□□□□ 0.33
HCFC1P51610 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.11■□□□□ 0.33
HCFC1P51610 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
HCFC1P51610 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.11■□□□□ 0.33
HCFC1P51610 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
HCFC1P51610 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC1P51610 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.1■□□□□ 0.33
HCFC1P51610 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC1P51610 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.1■□□□□ 0.33
HCFC1P51610 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC1P51610 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.1■□□□□ 0.33
HCFC1P51610 AC004951.3-201ENST00000418645 1148 ntBASIC17.1■□□□□ 0.33
HCFC1P51610 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HCFC1P51610 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.1■□□□□ 0.33
HCFC1P51610 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.1■□□□□ 0.33
HCFC1P51610 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC1P51610 AC083849.1-201ENST00000615227 514 ntBASIC17.1■□□□□ 0.33
HCFC1P51610 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC1P51610 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
HCFC1P51610 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC1P51610 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
HCFC1P51610 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.1■□□□□ 0.33
HCFC1P51610 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC1P51610 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC1P51610 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC1P51610 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC1P51610 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC1P51610 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.1■□□□□ 0.33
HCFC1P51610 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC1P51610 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.1■□□□□ 0.33
HCFC1P51610 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC1P51610 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC1P51610 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HCFC1P51610 MFAP1P1-201ENST00000442257 1255 ntBASIC17.09■□□□□ 0.33
HCFC1P51610 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.09■□□□□ 0.33
HCFC1P51610 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.09■□□□□ 0.33
HCFC1P51610 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.09■□□□□ 0.33
HCFC1P51610 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.09■□□□□ 0.33
HCFC1P51610 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC1P51610 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC1P51610 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.09■□□□□ 0.33
HCFC1P51610 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HCFC1P51610 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC1P51610 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC1P51610 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC1P51610 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HCFC1P51610 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.09■□□□□ 0.33
HCFC1P51610 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.09■□□□□ 0.33
HCFC1P51610 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.09■□□□□ 0.33
HCFC1P51610 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.09■□□□□ 0.33
HCFC1P51610 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.09■□□□□ 0.33
HCFC1P51610 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.09■□□□□ 0.33
HCFC1P51610 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC1P51610 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.08■□□□□ 0.33
HCFC1P51610 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HCFC1P51610 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HCFC1P51610 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.08■□□□□ 0.33
HCFC1P51610 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.08■□□□□ 0.33
HCFC1P51610 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HCFC1P51610 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.08■□□□□ 0.33
HCFC1P51610 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.08■□□□□ 0.33
HCFC1P51610 AP000550.4-202ENST00000639755 178 ntBASIC17.08■□□□□ 0.33
HCFC1P51610 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HCFC1P51610 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HCFC1P51610 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.08■□□□□ 0.32
HCFC1P51610 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HCFC1P51610 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms