Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.79■□□□□ 0.92
LHX1P48742 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.79■□□□□ 0.92
LHX1P48742 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.79■□□□□ 0.92
LHX1P48742 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.79■□□□□ 0.92
LHX1P48742 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
LHX1P48742 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LHX1P48742 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
LHX1P48742 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LHX1P48742 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.79■□□□□ 0.92
LHX1P48742 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LHX1P48742 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.79■□□□□ 0.92
LHX1P48742 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
LHX1P48742 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LHX1P48742 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LHX1P48742 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
LHX1P48742 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LHX1P48742 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
LHX1P48742 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LHX1P48742 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LHX1P48742 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.78■□□□□ 0.92
LHX1P48742 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
LHX1P48742 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LHX1P48742 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LHX1P48742 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
LHX1P48742 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
LHX1P48742 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LHX1P48742 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LHX1P48742 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.78■□□□□ 0.92
LHX1P48742 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LHX1P48742 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
LHX1P48742 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LHX1P48742 AP003071.4-201ENST00000562276 1284 ntBASIC20.78■□□□□ 0.92
LHX1P48742 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.78■□□□□ 0.92
LHX1P48742 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
LHX1P48742 AL031985.4-201ENST00000642138 673 ntBASIC20.78■□□□□ 0.92
LHX1P48742 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LHX1P48742 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LHX1P48742 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LHX1P48742 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LHX1P48742 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
LHX1P48742 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LHX1P48742 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
LHX1P48742 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LHX1P48742 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.77■□□□□ 0.92
LHX1P48742 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
LHX1P48742 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.77■□□□□ 0.92
LHX1P48742 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LHX1P48742 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LHX1P48742 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.77■□□□□ 0.92
LHX1P48742 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.77■□□□□ 0.92
LHX1P48742 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.77■□□□□ 0.92
LHX1P48742 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.77■□□□□ 0.92
LHX1P48742 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
LHX1P48742 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
LHX1P48742 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
LHX1P48742 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
LHX1P48742 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LHX1P48742 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LHX1P48742 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
LHX1P48742 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LHX1P48742 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.76■□□□□ 0.91
LHX1P48742 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LHX1P48742 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LHX1P48742 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.76■□□□□ 0.91
LHX1P48742 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LHX1P48742 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LHX1P48742 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.76■□□□□ 0.91
LHX1P48742 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LHX1P48742 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LHX1P48742 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.76■□□□□ 0.91
LHX1P48742 AC131212.4-201ENST00000623606 975 ntBASIC20.76■□□□□ 0.91
LHX1P48742 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.76■□□□□ 0.91
LHX1P48742 HLA-A-209ENST00000638375 975 ntBASIC20.76■□□□□ 0.91
LHX1P48742 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
LHX1P48742 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.76■□□□□ 0.91
LHX1P48742 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LHX1P48742 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LHX1P48742 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.76■□□□□ 0.91
LHX1P48742 AC112907.3-201ENST00000577781 2400 ntBASIC20.76■□□□□ 0.91
LHX1P48742 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LHX1P48742 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.76■□□□□ 0.91
LHX1P48742 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LHX1P48742 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LHX1P48742 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LHX1P48742 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LHX1P48742 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.75■□□□□ 0.91
LHX1P48742 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LHX1P48742 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LHX1P48742 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.75■□□□□ 0.91
LHX1P48742 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
LHX1P48742 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.75■□□□□ 0.91
LHX1P48742 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.75■□□□□ 0.91
LHX1P48742 AC026271.3-201ENST00000571884 352 ntBASIC20.75■□□□□ 0.91
LHX1P48742 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.75■□□□□ 0.91
LHX1P48742 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.75■□□□□ 0.91
LHX1P48742 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.75■□□□□ 0.91
LHX1P48742 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LHX1P48742 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
LHX1P48742 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LHX1P48742 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms