Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
GABRA4P48169 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GABRA4P48169 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.61■□□□□ 0.57
GABRA4P48169 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.61■□□□□ 0.57
GABRA4P48169 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GABRA4P48169 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.61■□□□□ 0.57
GABRA4P48169 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
GABRA4P48169 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GABRA4P48169 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
GABRA4P48169 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.61■□□□□ 0.57
GABRA4P48169 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
GABRA4P48169 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GABRA4P48169 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GABRA4P48169 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
GABRA4P48169 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.6■□□□□ 0.57
GABRA4P48169 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GABRA4P48169 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GABRA4P48169 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.6■□□□□ 0.57
GABRA4P48169 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
GABRA4P48169 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.6■□□□□ 0.57
GABRA4P48169 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GABRA4P48169 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GABRA4P48169 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GABRA4P48169 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GABRA4P48169 RBM17P1-201ENST00000453646 1190 ntBASIC18.6■□□□□ 0.57
GABRA4P48169 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.6■□□□□ 0.57
GABRA4P48169 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.6■□□□□ 0.57
GABRA4P48169 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.6■□□□□ 0.57
GABRA4P48169 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.6■□□□□ 0.57
GABRA4P48169 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GABRA4P48169 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
GABRA4P48169 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GABRA4P48169 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GABRA4P48169 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
GABRA4P48169 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
GABRA4P48169 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GABRA4P48169 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GABRA4P48169 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GABRA4P48169 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GABRA4P48169 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GABRA4P48169 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
GABRA4P48169 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GABRA4P48169 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.59■□□□□ 0.57
GABRA4P48169 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GABRA4P48169 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
GABRA4P48169 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
GABRA4P48169 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
GABRA4P48169 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
GABRA4P48169 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GABRA4P48169 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.59■□□□□ 0.57
GABRA4P48169 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GABRA4P48169 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GABRA4P48169 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GABRA4P48169 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
GABRA4P48169 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.59■□□□□ 0.57
GABRA4P48169 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.59■□□□□ 0.57
GABRA4P48169 AC026271.3-201ENST00000571884 352 ntBASIC18.59■□□□□ 0.57
GABRA4P48169 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.59■□□□□ 0.57
GABRA4P48169 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.59■□□□□ 0.57
GABRA4P48169 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.59■□□□□ 0.57
GABRA4P48169 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.59■□□□□ 0.57
GABRA4P48169 AL031985.4-201ENST00000642138 673 ntBASIC18.59■□□□□ 0.57
GABRA4P48169 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
GABRA4P48169 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GABRA4P48169 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GABRA4P48169 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GABRA4P48169 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.58■□□□□ 0.57
GABRA4P48169 AC079598.2-202ENST00000546624 1451 ntBASIC18.58■□□□□ 0.57
GABRA4P48169 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
GABRA4P48169 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
GABRA4P48169 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
GABRA4P48169 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
GABRA4P48169 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
GABRA4P48169 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.58■□□□□ 0.57
GABRA4P48169 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
GABRA4P48169 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
GABRA4P48169 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
GABRA4P48169 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GABRA4P48169 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GABRA4P48169 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
GABRA4P48169 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GABRA4P48169 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.58■□□□□ 0.56
GABRA4P48169 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.58■□□□□ 0.56
GABRA4P48169 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.58■□□□□ 0.56
GABRA4P48169 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.58■□□□□ 0.56
GABRA4P48169 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.58■□□□□ 0.56
GABRA4P48169 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.58■□□□□ 0.56
GABRA4P48169 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.58■□□□□ 0.56
GABRA4P48169 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.58■□□□□ 0.56
GABRA4P48169 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GABRA4P48169 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
GABRA4P48169 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GABRA4P48169 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
GABRA4P48169 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.58■□□□□ 0.56
GABRA4P48169 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GABRA4P48169 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GABRA4P48169 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GABRA4P48169 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GABRA4P48169 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GABRA4P48169 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms