Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CBX5P45973 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CBX5P45973 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.83■□□□□ 0.28
CBX5P45973 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CBX5P45973 NME4-202ENST00000382940 766 ntTSL 3 BASIC16.83■□□□□ 0.28
CBX5P45973 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CBX5P45973 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CBX5P45973 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CBX5P45973 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.83■□□□□ 0.28
CBX5P45973 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CBX5P45973 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.83■□□□□ 0.28
CBX5P45973 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CBX5P45973 RBM17P2-201ENST00000616397 1405 ntBASIC16.83■□□□□ 0.28
CBX5P45973 NME4-211ENST00000620944 1193 ntTSL 2 BASIC16.83■□□□□ 0.28
CBX5P45973 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CBX5P45973 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CBX5P45973 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.83■□□□□ 0.28
CBX5P45973 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CBX5P45973 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBX5P45973 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBX5P45973 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBX5P45973 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBX5P45973 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.82■□□□□ 0.28
CBX5P45973 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBX5P45973 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CBX5P45973 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.82■□□□□ 0.28
CBX5P45973 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CBX5P45973 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBX5P45973 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBX5P45973 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.82■□□□□ 0.28
CBX5P45973 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CBX5P45973 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CBX5P45973 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.82■□□□□ 0.28
CBX5P45973 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CBX5P45973 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CBX5P45973 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.82■□□□□ 0.28
CBX5P45973 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.82■□□□□ 0.28
CBX5P45973 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.82■□□□□ 0.28
CBX5P45973 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.82■□□□□ 0.28
CBX5P45973 SLC7A5P1-201ENST00000568957 537 ntBASIC16.82■□□□□ 0.28
CBX5P45973 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CBX5P45973 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.82■□□□□ 0.28
CBX5P45973 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.82■□□□□ 0.28
CBX5P45973 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.82■□□□□ 0.28
CBX5P45973 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CBX5P45973 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBX5P45973 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.82■□□□□ 0.28
CBX5P45973 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CBX5P45973 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CBX5P45973 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.82■□□□□ 0.28
CBX5P45973 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBX5P45973 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBX5P45973 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.81■□□□□ 0.28
CBX5P45973 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.81■□□□□ 0.28
CBX5P45973 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.81■□□□□ 0.28
CBX5P45973 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.81■□□□□ 0.28
CBX5P45973 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CBX5P45973 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CBX5P45973 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CBX5P45973 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CBX5P45973 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBX5P45973 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.81■□□□□ 0.28
CBX5P45973 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CBX5P45973 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBX5P45973 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CBX5P45973 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CBX5P45973 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.81■□□□□ 0.28
CBX5P45973 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CBX5P45973 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBX5P45973 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBX5P45973 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.81■□□□□ 0.28
CBX5P45973 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.81■□□□□ 0.28
CBX5P45973 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.81■□□□□ 0.28
CBX5P45973 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.81■□□□□ 0.28
CBX5P45973 AC104187.1-201ENST00000607510 612 ntBASIC16.81■□□□□ 0.28
CBX5P45973 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CBX5P45973 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.81■□□□□ 0.28
CBX5P45973 AL136967.2-201ENST00000623968 743 ntBASIC16.81■□□□□ 0.28
CBX5P45973 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBX5P45973 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBX5P45973 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBX5P45973 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBX5P45973 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBX5P45973 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBX5P45973 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CBX5P45973 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CBX5P45973 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CBX5P45973 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CBX5P45973 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CBX5P45973 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CBX5P45973 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CBX5P45973 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CBX5P45973 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CBX5P45973 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CBX5P45973 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CBX5P45973 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CBX5P45973 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CBX5P45973 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CBX5P45973 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CBX5P45973 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms