Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNA4P43681 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.78■□□□□ 0.76
CHRNA4P43681 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.77■□□□□ 0.76
CHRNA4P43681 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHRNA4P43681 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHRNA4P43681 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CHRNA4P43681 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CHRNA4P43681 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CHRNA4P43681 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHRNA4P43681 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHRNA4P43681 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.77■□□□□ 0.76
CHRNA4P43681 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.77■□□□□ 0.76
CHRNA4P43681 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CHRNA4P43681 AC069544.1-201ENST00000609399 999 ntBASIC19.77■□□□□ 0.76
CHRNA4P43681 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CHRNA4P43681 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CHRNA4P43681 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CHRNA4P43681 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CHRNA4P43681 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
CHRNA4P43681 AC093484.2-201ENST00000580996 2166 ntBASIC19.77■□□□□ 0.75
CHRNA4P43681 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.77■□□□□ 0.75
CHRNA4P43681 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.77■□□□□ 0.75
CHRNA4P43681 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
CHRNA4P43681 AP006587.1-201ENST00000534129 1502 ntBASIC19.76■□□□□ 0.75
CHRNA4P43681 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA4P43681 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.76■□□□□ 0.75
CHRNA4P43681 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.76■□□□□ 0.75
CHRNA4P43681 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CHRNA4P43681 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.76■□□□□ 0.75
CHRNA4P43681 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA4P43681 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.76■□□□□ 0.75
CHRNA4P43681 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.76■□□□□ 0.75
CHRNA4P43681 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA4P43681 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA4P43681 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.76■□□□□ 0.75
CHRNA4P43681 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CHRNA4P43681 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA4P43681 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.76■□□□□ 0.75
CHRNA4P43681 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA4P43681 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.76■□□□□ 0.75
CHRNA4P43681 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.76■□□□□ 0.75
CHRNA4P43681 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.76■□□□□ 0.75
CHRNA4P43681 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA4P43681 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA4P43681 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.76■□□□□ 0.75
CHRNA4P43681 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.76■□□□□ 0.75
CHRNA4P43681 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA4P43681 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA4P43681 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CHRNA4P43681 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA4P43681 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CHRNA4P43681 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CHRNA4P43681 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CHRNA4P43681 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.75■□□□□ 0.75
CHRNA4P43681 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.75■□□□□ 0.75
CHRNA4P43681 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CHRNA4P43681 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNA4P43681 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNA4P43681 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNA4P43681 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNA4P43681 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNA4P43681 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNA4P43681 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.75■□□□□ 0.75
CHRNA4P43681 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNA4P43681 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.75■□□□□ 0.75
CHRNA4P43681 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.75■□□□□ 0.75
CHRNA4P43681 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNA4P43681 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.75■□□□□ 0.75
CHRNA4P43681 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNA4P43681 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA4P43681 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.74■□□□□ 0.75
CHRNA4P43681 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CHRNA4P43681 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA4P43681 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.74■□□□□ 0.75
CHRNA4P43681 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.74■□□□□ 0.75
CHRNA4P43681 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA4P43681 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
CHRNA4P43681 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.74■□□□□ 0.75
CHRNA4P43681 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.74■□□□□ 0.75
CHRNA4P43681 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
CHRNA4P43681 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.74■□□□□ 0.75
CHRNA4P43681 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA4P43681 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA4P43681 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA4P43681 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.74■□□□□ 0.75
CHRNA4P43681 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA4P43681 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA4P43681 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
CHRNA4P43681 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.73■□□□□ 0.75
CHRNA4P43681 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA4P43681 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.73■□□□□ 0.75
CHRNA4P43681 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA4P43681 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.73■□□□□ 0.75
CHRNA4P43681 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CHRNA4P43681 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA4P43681 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA4P43681 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.73■□□□□ 0.75
CHRNA4P43681 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA4P43681 KRT17P3-201ENST00000420566 1262 ntBASIC19.73■□□□□ 0.75
CHRNA4P43681 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms