Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT20P35900 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT20P35900 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT20P35900 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.59■□□□□ 0.57
KRT20P35900 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT20P35900 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.59■□□□□ 0.57
KRT20P35900 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
KRT20P35900 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.59■□□□□ 0.57
KRT20P35900 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.59■□□□□ 0.57
KRT20P35900 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT20P35900 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT20P35900 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT20P35900 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.59■□□□□ 0.57
KRT20P35900 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
KRT20P35900 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
KRT20P35900 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
KRT20P35900 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.58■□□□□ 0.57
KRT20P35900 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
KRT20P35900 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
KRT20P35900 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
KRT20P35900 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
KRT20P35900 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
KRT20P35900 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.58■□□□□ 0.57
KRT20P35900 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.58■□□□□ 0.57
KRT20P35900 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRT20P35900 AC004408.2-201ENST00000623613 2777 ntBASIC18.58■□□□□ 0.56
KRT20P35900 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRT20P35900 HLA-G-202ENST00000376815 851 ntBASIC18.58■□□□□ 0.56
KRT20P35900 HLA-G-203ENST00000376818 1127 ntBASIC18.58■□□□□ 0.56
KRT20P35900 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRT20P35900 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRT20P35900 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.58■□□□□ 0.56
KRT20P35900 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRT20P35900 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRT20P35900 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
KRT20P35900 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRT20P35900 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
KRT20P35900 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRT20P35900 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT20P35900 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT20P35900 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT20P35900 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
KRT20P35900 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
KRT20P35900 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.57■□□□□ 0.56
KRT20P35900 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
KRT20P35900 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT20P35900 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
KRT20P35900 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
KRT20P35900 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.57■□□□□ 0.56
KRT20P35900 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.57■□□□□ 0.56
KRT20P35900 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.57■□□□□ 0.56
KRT20P35900 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.57■□□□□ 0.56
KRT20P35900 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.57■□□□□ 0.56
KRT20P35900 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT20P35900 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.57■□□□□ 0.56
KRT20P35900 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
KRT20P35900 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT20P35900 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT20P35900 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
KRT20P35900 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT20P35900 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.56■□□□□ 0.56
KRT20P35900 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT20P35900 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.56■□□□□ 0.56
KRT20P35900 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
KRT20P35900 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT20P35900 AL390719.1-204ENST00000412397 1219 ntBASIC18.56■□□□□ 0.56
KRT20P35900 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
KRT20P35900 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.56■□□□□ 0.56
KRT20P35900 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.56■□□□□ 0.56
KRT20P35900 AC098934.4-201ENST00000564127 592 ntBASIC18.56■□□□□ 0.56
KRT20P35900 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
KRT20P35900 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT20P35900 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT20P35900 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT20P35900 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT20P35900 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT20P35900 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT20P35900 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT20P35900 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT20P35900 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT20P35900 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
KRT20P35900 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.56■□□□□ 0.56
KRT20P35900 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT20P35900 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT20P35900 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.55■□□□□ 0.56
KRT20P35900 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT20P35900 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT20P35900 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.55■□□□□ 0.56
KRT20P35900 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT20P35900 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
KRT20P35900 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT20P35900 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.55■□□□□ 0.56
KRT20P35900 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.55■□□□□ 0.56
KRT20P35900 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT20P35900 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT20P35900 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.55■□□□□ 0.56
KRT20P35900 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
KRT20P35900 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.55■□□□□ 0.56
KRT20P35900 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KRT20P35900 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms