Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCK1P35558 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCK1P35558 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PCK1P35558 AC092368.3-202ENST00000574180 1591 ntBASIC20.59■□□□□ 0.89
PCK1P35558 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCK1P35558 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCK1P35558 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCK1P35558 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.59■□□□□ 0.89
PCK1P35558 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.59■□□□□ 0.89
PCK1P35558 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.59■□□□□ 0.89
PCK1P35558 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PCK1P35558 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.59■□□□□ 0.89
PCK1P35558 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCK1P35558 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PCK1P35558 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PCK1P35558 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.59■□□□□ 0.89
PCK1P35558 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.59■□□□□ 0.89
PCK1P35558 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PCK1P35558 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCK1P35558 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.59■□□□□ 0.89
PCK1P35558 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCK1P35558 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PCK1P35558 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
PCK1P35558 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.59■□□□□ 0.89
PCK1P35558 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCK1P35558 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
PCK1P35558 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCK1P35558 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
PCK1P35558 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCK1P35558 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.58■□□□□ 0.89
PCK1P35558 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCK1P35558 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCK1P35558 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.58■□□□□ 0.89
PCK1P35558 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.58■□□□□ 0.89
PCK1P35558 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.58■□□□□ 0.89
PCK1P35558 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCK1P35558 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.58■□□□□ 0.89
PCK1P35558 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.58■□□□□ 0.89
PCK1P35558 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCK1P35558 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCK1P35558 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCK1P35558 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCK1P35558 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.58■□□□□ 0.89
PCK1P35558 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.58■□□□□ 0.89
PCK1P35558 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
PCK1P35558 PNMA6B-201ENST00000538162 1200 ntBASIC20.58■□□□□ 0.89
PCK1P35558 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.58■□□□□ 0.89
PCK1P35558 AC006557.6-201ENST00000623071 864 ntBASIC20.58■□□□□ 0.89
PCK1P35558 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCK1P35558 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCK1P35558 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCK1P35558 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.58■□□□□ 0.88
PCK1P35558 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
PCK1P35558 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.58■□□□□ 0.88
PCK1P35558 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PCK1P35558 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.58■□□□□ 0.88
PCK1P35558 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PCK1P35558 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCK1P35558 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PCK1P35558 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.58■□□□□ 0.88
PCK1P35558 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCK1P35558 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.57■□□□□ 0.88
PCK1P35558 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCK1P35558 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.57■□□□□ 0.88
PCK1P35558 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCK1P35558 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.57■□□□□ 0.88
PCK1P35558 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCK1P35558 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCK1P35558 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.57■□□□□ 0.88
PCK1P35558 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.57■□□□□ 0.88
PCK1P35558 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.57■□□□□ 0.88
PCK1P35558 TFP1-202ENST00000475455 1573 ntBASIC20.57■□□□□ 0.88
PCK1P35558 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.57■□□□□ 0.88
PCK1P35558 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.57■□□□□ 0.88
PCK1P35558 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.57■□□□□ 0.88
PCK1P35558 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.57■□□□□ 0.88
PCK1P35558 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.57■□□□□ 0.88
PCK1P35558 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
PCK1P35558 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCK1P35558 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCK1P35558 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.57■□□□□ 0.88
PCK1P35558 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCK1P35558 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCK1P35558 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
PCK1P35558 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PCK1P35558 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCK1P35558 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCK1P35558 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCK1P35558 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCK1P35558 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PCK1P35558 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.56■□□□□ 0.88
PCK1P35558 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCK1P35558 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PCK1P35558 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.56■□□□□ 0.88
PCK1P35558 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.56■□□□□ 0.88
PCK1P35558 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.56■□□□□ 0.88
PCK1P35558 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.56■□□□□ 0.88
PCK1P35558 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCK1P35558 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCK1P35558 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms